RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	PTBP2	Q9UKA9	531 aa	Known RBP	13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ICK	Q9UPZ9	632 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	EP300	Q09472	2414 aa	Predicted RBP	13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PCNX2	A6NKB5	2137 aa		13.54	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NUDT21	O43809	227 aa	Known RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KDM1A	O60341	852 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	S100B	P04271	92 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GFAP	P14136	432 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KCNA4	P22459	653 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PKLR	P30613	574 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GRK6	P43250	576 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SERPINB4	P48594	390 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HNMT	P50135	292 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RAB28	P51157	221 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ALDH18A1	P54886	795 aa	Known RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ARHGAP19	Q14CB8	494 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SETDB1	Q15047	1291 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PFKFB4	Q16877	469 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PROX2	Q3B8N5	592 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	AGTRAP	Q6RW13	159 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZNF438	Q7Z4V0	828 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NUDCD3	Q8IVD9	361 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TCAIM	Q8N3R3	496 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ATL1	Q8WXF7	558 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SH3KBP1	Q96B97	665 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TMEM79	Q9BSE2	394 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RAB11FIP5	Q9BXF6	653 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TWSG1	Q9GZX9	223 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	OXSM	Q9NWU1	459 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RAPGEFL1	Q9UHV5	662 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PADI4	Q9UM07	663 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RNF215	Q9Y6U7	377 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LILRA5	A6NI73	299 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	STX16-NPEPL1	H3BU86	382 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	STX16	O14662	325 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	IPO13	O94829	963 aa	Known RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	BPGM	P07738	259 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MYF5	P13349	255 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GLB1	P16278	677 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ALDH3A1	P30838	453 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SHMT2	P34897	504 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GGT5	P36269	586 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PNLIPRP1	P54315	467 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NR1D2	Q14995	579 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CYP2A13	Q16696	494 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	C18orf21	Q32NC0	220 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	INAVA	Q3KP66	663 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ANKS6	Q68DC2	871 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZNF761	Q86XN6	746 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SLC22A9	Q8IVM8	553 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	C10orf107	Q8IVU9	208 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LMNTD1	Q8N9Z9	388 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	OR2L8	Q8NGY9	312 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HMGCLL1	Q8TB92	370 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	UBTD2	Q8WUN7	234 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LCN9	Q8WX39	176 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SREK1	Q8WXA9	508 aa	Known RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	JPH3	Q8WXH2	748 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CCDC126	Q96EE4	140 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PHF21B	Q96EK2	531 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	XKR8	Q9H6D3	395 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NCKIPSD	Q9NZQ3	722 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LRIT1	Q9P2V4	623 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	LNPEP	Q9UIQ6	1025 aa		13.53	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FAM221B	A6H8Z2	402 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	C4orf47	A7E2U8	309 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852		E7ENX8	843 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	BIRC5	O15392	142 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	GDF9	O60383	454 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	HSD17B2	P37059	387 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	SLC6A12	P48065	614 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	AGTR2	P50052	363 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	PRKAA2	P54646	552 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	TAP2	Q03519	686 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	FASTK	Q14296	549 aa	Known RBP	13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	PLCL1	Q15111	1095 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	NR0B2	Q15466	257 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	FBXO48	Q5FWF7	155 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	AMIGO1	Q86WK6	493 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	KLHDC8A	Q8IYD2	350 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	SYTL1	Q8IYJ3	562 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	RAB42	Q8N4Z0	105 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	LINC01555	Q8NAE3	123 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	PPFIBP2	Q8ND30	876 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	OR6C4	Q8NGE1	309 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	OR56A3	Q8NH54	315 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	LRRC8C	Q8TDW0	803 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	ESAM	Q96AP7	390 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	TMEM237	Q96Q45	408 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	TBC1D10A	Q9BXI6	508 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	C1QTNF3	Q9BXJ4	246 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	ATG10	Q9H0Y0	220 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	WWOX	Q9NZC7	414 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	ASB1	Q9Y576	335 aa		13.52	□□□□□ -0.25
ATPAF2-208	ENST00000496852	FAM186A	A6NE01	2351 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms