RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 IGHV1OR21-1A0A087WYE8 117 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 KRT87PA6NCN2 255 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 PROS1P07225 676 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 ERGP11308 486 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 CREB1P16220 341 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 SDHBP21912 280 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 PPM1FP49593 454 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-222ENST00000496567 ACADVLP49748 655 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 PNLIPRP1P54315 467 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 MAGOHP61326 146 aaKnown RBP21.09■□□□□ 0.97
C9orf3-222ENST00000496567 ILKQ13418 452 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 OOSP2Q86WS3 158 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 SYTL1Q8IYJ3 562 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 TCAIMQ8N3R3 496 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 DEFB124Q8NES8 71 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 HMGCLL1Q8TB92 370 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 DENND1AQ8TEH3 1009 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 ZNF480Q8WV37 535 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 IL17FQ96PD4 163 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 STOX2Q9P2F5 926 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-222ENST00000496567 CPSF2Q9P2I0 782 aaKnown RBP21.09■□□□□ 0.97
C9orf3-222ENST00000496567 TMCO1Q9UM00 188 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 PLLPQ9Y342 182 aa21.09■□□□□ 0.97
C9orf3-222ENST00000496567 PTPRZ1P23471 2315 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-222ENST00000496567 OR6C74A6NCV1 312 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 NCF1BA6NI72 391 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-222ENST00000496567 NCF1CA8MVU1 366 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-222ENST00000496567 UBXN8O00124 270 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 TK2O00142 265 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 TM4SF5O14894 197 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 B4GAT1O43505 415 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 DUX1O43812 170 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 TYROBPO43914 113 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 NCF1P14598 390 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-222ENST00000496567 TAC1P20366 129 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 IMPA1P29218 277 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 SULT1C3Q6IMI6 304 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 MBOAT1Q6ZNC8 495 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 PDPRQ8NCN5 879 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 RHBDF1Q96CC6 855 aa21.08■□□□□ 0.97
C9orf3-222ENST00000496567 OR5K3A6NET4 321 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 HMGB1P1B2RPK0 211 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-222ENST00000496567 PLIN3O60664 434 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 SMIM24O75264 130 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 GFAPP14136 432 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 TYRP1P17643 537 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 PLA2G5P39877 138 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 CAPZBP47756 277 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 PRKAA1Q13131 559 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 ARMC6Q6NXE6 501 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 AGTRAPQ6RW13 159 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 TMEM151AQ8N4L1 468 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 WDR48Q8TAF3 677 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 TCP10LQ8TDR4 215 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 SMPDL3AQ92484 453 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 HRASLS2Q9NWW9 162 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 MID2Q9UJV3 735 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 EMCNQ9ULC0 261 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 PCDHGA1Q9Y5H4 931 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 ENTPD2Q9Y5L3 495 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 ANKRD12Q6UB98 2062 aa21.07■□□□□ 0.96
C9orf3-222ENST00000496567 TARM1B6A8C7 271 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 MATN2O00339 956 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 PRPF4O43172 522 aaKnown RBP eCLIP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 PROCP04070 461 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CHRM5P08912 532 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 MTHFD2P13995 350 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 SQSTM1Q13501 440 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 AMZ1Q400G9 498 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 TTMPQ5BVD1 217 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 ADGRF3Q8IZF5 1079 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 FBXO39Q8N4B4 442 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CCDC63Q8NA47 563 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 LINC01555Q8NAE3 123 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 RDH11Q8TC12 318 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 RSC1A1Q92681 617 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 SLC22A18Q96BI1 424 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 NRTNQ99748 197 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 ABCG4Q9H172 646 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 LRRN3Q9H3W5 708 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CNOT10Q9H9A5 744 aaKnown RBP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 KCNK9Q9NPC2 374 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 WWOXQ9NZC7 414 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 PIPSLA2A3N6 862 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 E7ENX8 843 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 BTN3A3O00478 584 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 RFPL3O75679 317 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 RPLP0P05388 317 aaKnown RBP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 SBK3P0C264 359 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CEACAM1P13688 526 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 POLR2CP19387 275 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CCND1P24385 295 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CD1CP29017 333 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CCL7P80098 99 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 E2F1Q01094 437 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 TAP2Q03519 686 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 GPS2Q13227 327 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 KIR2DS3Q14952 304 aa21.06■□□□□ 0.96
C9orf3-222ENST00000496567 CLPPQ16740 277 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-222ENST00000496567 HSP90B2PQ58FF3 399 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms