RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 FAM20CQ8IXL6 584 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 RBM12BQ8IXT5 1001 aaKnown RBP13.07□□□□□ -0.32
PTPN7-218ENST00000496197 PDPRQ8NCN5 879 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 FLVCR1-AS1Q8TAF5 88 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 STAG3L4Q8TBR4 150 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 MCOLN3Q8TDD5 553 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 TCP10LQ8TDR4 215 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 PPM1MQ96MI6 270 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 SMC6Q96SB8 1091 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 ATG10Q9H0Y0 220 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 ARL15Q9NXU5 204 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 NCKIPSDQ9NZQ3 722 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 DCDC2Q9UHG0 476 aa13.07□□□□□ -0.32
PTPN7-218ENST00000496197 DCHS1Q96JQ0 3298 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PTPRBP23467 1997 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 E7ENX8 843 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 G3V2L1 256 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PRICKLE3O43900 615 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PLIN3O60664 434 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SUPT3HO75486 399 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 RPLP0P05388 317 aaKnown RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PROS1P07225 676 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 POLR2CP19387 275 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 RPA3P35244 121 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 GPR3P46089 330 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 AGTR2P50052 363 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 GFERP55789 205 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 CDKL1Q00532 357 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 TAP2Q03519 686 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 CYP2A13Q16696 494 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 RSPO4Q2I0M5 234 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 KLC3Q6P597 504 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 TTC23LQ6PF05 361 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 AGTRAPQ6RW13 159 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 GLRX5Q86SX6 157 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SLCO6A1Q86UG4 719 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 AVL9Q8NBF6 648 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 OR6C4Q8NGE1 309 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 OR2L8Q8NGY9 312 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 OR10G6Q8NH81 332 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 MAGEC3Q8TD91 643 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 NAT6Q93015 286 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SH3KBP1Q96B97 665 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PYCR2Q96C36 320 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 FBXL8Q96CD0 374 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 ATP6V1G3Q96LB4 118 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 CCDC138Q96M89 665 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 CDC6Q99741 560 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 NUDT22Q9BRQ3 303 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 MRPL46Q9H2W6 279 aaKnown RBP13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SRMSQ9H3Y6 488 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 ACSS2Q9NR19 701 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SENP1Q9P0U3 644 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 SH2B3Q9UQQ2 575 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 PLLPQ9Y342 182 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 ACTL7BQ9Y614 415 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 HEATR5BQ9P2D3 2071 aa13.06□□□□□ -0.32
PTPN7-218ENST00000496197 OR5K3A6NET4 321 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 KLK8O60259 260 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CHRM5P08912 532 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 RBP1P09455 135 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CSRP1P21291 193 aaKnown RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 SHMT2P34897 504 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 GDF5P43026 501 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CAPZBP47756 277 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 LSSP48449 732 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 DUSP3P51452 185 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 EPHA4P54764 986 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 AP1S2P56377 157 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 TBPL1P62380 186 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CCDC157Q569K6 752 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 ZNF574Q6ZN55 896 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 USP53Q70EK8 1073 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 RPS27LQ71UM5 84 aaKnown RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 LCA5Q86VQ0 697 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CNPY4Q8N129 248 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 TSNARE1Q96NA8 513 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 FAM111AQ96PZ2 611 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 EGFL8Q99944 293 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 MRPL57Q9BQC6 102 aaKnown RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 ABCG4Q9H172 646 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 ABCF3Q9NUQ8 709 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 INTS7Q9NVH2 962 aaKnown RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 EVA1BQ9NVM1 165 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 NUDT4Q9NZJ9 180 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CD274Q9NZQ7 290 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 PTBP2Q9UKA9 531 aaKnown RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
PTPN7-218ENST00000496197 GRID1Q9ULK0 1009 aa13.05□□□□□ -0.32
PTPN7-218ENST00000496197 A8MT66 165 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms