RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	ADGRG5	Q8IZF4	528 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	APCDD1	Q8J025	514 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC22A18AS	Q8N1D0	253 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	STK40	Q8N2I9	435 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	FSTL5	Q8N475	847 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ZNF557	Q8N988	423 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	METTL6	Q8TCB7	284 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	RNF139	Q8WU17	664 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ATG4A	Q8WYN0	398 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	AZIN2	Q96A70	460 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	VOPP1	Q96AW1	172 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	MIB2	Q96AX9	1013 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ALG14	Q96F25	216 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SERPINB11	Q96P15	392 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	LENG8	Q96PV6	779 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	NR1H4	Q96RI1	486 aa	Predicted RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	TEX101	Q9BY14	249 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	NEUROG2	Q9H2A3	272 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ERVMER34-1	Q9H9K5	563 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	POLR1B	Q9H9Y6	1135 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	LRRC4	Q9HBW1	653 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	GDF3	Q9NR23	364 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ABCC13	Q9NSE7	274 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SEPT11	Q9NVA2	429 aa	Known RBP	4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	CYTH4	Q9UIA0	394 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SARDH	Q9UL12	918 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	SATB2	Q9UPW6	733 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	NEU3	Q9UQ49	428 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ERVW-1	Q9UQF0	538 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	CA5B	Q9Y2D0	317 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	OR51B4	Q9Y5P0	310 aa		4.26	□□□□□ -1.73
VPS52-222	ENST00000495981	ANKRD36	A6QL64	1941 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	JMJD1C	Q15652	2540 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PRAMEF33	A0A0G2JMD5	474 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981		A0A1B0GVM2	712 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	hCG_1807616	A0A1W2PRN6	198 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	TCAF2	A6NFQ2	919 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	FAM47DP	A6NHR8	397 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CDRT15L2	A8MXV6	281 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	KCNU1	A8MYU2	1149 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981		E5RJQ4	531 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	MASP2	O00187	686 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	DFNA5	O60443	496 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PRAMEF10	O60809	474 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	RTN2	O75298	545 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CS	O75390	466 aa	Known RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	MOCS2	O96007	188 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	SRPRA	P08240	638 aa	Known RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	INHBB	P09529	407 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	MED14OS	P0DP75	135 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	UBL4A	P11441	157 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	VDR	P11473	427 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CD19	P15391	556 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PDGFRA	P16234	1089 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PRLR	P16471	622 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	GOT1	P17174	413 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	POLR2E	P19388	210 aa	Known RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	TACR2	P21452	398 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CD38	P28907	300 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PRKAR1B	P31321	381 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC8A1	P32418	973 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PRCP	P42785	496 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	GPD2	P43304	727 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	FMO5	P49326	533 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	PLK1	P53350	603 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	C21orf59	P57076	290 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC8A3	P57103	927 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	RPS3A	P61247	264 aa	Known RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	GCNT1	Q02742	428 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	LRRC63	Q05C16	580 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	ILK	Q13418	452 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	GRM7	Q14831	915 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	ZNF284	Q2VY69	593 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	LRRK1	Q38SD2	2015 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CD300E	Q496F6	205 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	SYPL2	Q5VXT5	272 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	NAA35	Q5VZE5	725 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	TTI2	Q6NXR4	508 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	DENND1B	Q6P3S1	775 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	SLC22A25	Q6T423	547 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	TMEM270	Q6UE05	265 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	TMCO3	Q6UWJ1	677 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	RINL	Q6ZS11	566 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	ABI3BP	Q7Z7G0	1075 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CPLX4	Q7Z7G2	160 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	IQCH	Q86VS3	1027 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CHSY1	Q86X52	802 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	HSCB	Q8IWL3	235 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	IZUMO1	Q8IYV9	350 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	ZNF683	Q8IZ20	524 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	MMP21	Q8N119	569 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	CCAR2	Q8N163	923 aa	Known RBP	4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	TTC30B	Q8N4P2	665 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	ENGASE	Q8NFI3	743 aa		4.25	□□□□□ -1.73
VPS52-222	ENST00000495981	OR4C6	Q8NH72	309 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms