RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 LIX1LQ8IVB5 337 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 DNAJC22Q8N4W6 341 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 SGPP1Q9BX95 441 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 NLRC4Q9NPP4 1024 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 RAD18Q9NS91 495 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 CUTCQ9NTM9 273 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 EURLQ9NYK6 297 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 ACSL5Q9ULC5 683 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 HEBP2Q9Y5Z4 205 aa13.81□□□□□ -0.2
CHMP2B-205ENST00000494980 ANKRD66B4E2M5 251 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 RASGRF2O14827 1237 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 CDC40O60508 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 PIRTP0C851 137 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 CXCR2P25025 360 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 CD96P40200 585 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 PEX19P40855 299 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 ZFP36L2P47974 494 aaKnown RBP13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 FANCCQ00597 558 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 OCA2Q04671 838 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 DPYSQ14117 519 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 EMC4Q5J8M3 183 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 CATSPEREQ5SY80 951 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 WDR53Q7Z5U6 358 aaPredicted RBP13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 AMIGO1Q86WK6 493 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 OR52E1Q8NGJ3 308 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 BRSK1Q8TDC3 778 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 DENND1AQ8TEH3 1009 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 UTP23Q9BRU9 249 aaKnown RBP13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 PLA2G12AQ9BZM1 189 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 ZCCHC2Q9C0B9 1178 aaKnown RBP13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
CHMP2B-205ENST00000494980 EIF3CLB5ME19 914 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 CLDN4O14493 209 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 TFECO14948 347 aaPredicted RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 GNA14O95837 355 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 NID1P14543 1247 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 UGT1A1P22309 533 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 TACR1P25103 407 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 MCM3P25205 808 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 STIM1Q13586 685 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 FASTKQ14296 549 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 SLC25A35Q3KQZ1 300 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 ACER2Q5QJU3 275 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 FNBP1LQ5T0N5 605 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 ALG1LQ6GMV1 187 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 KDELC1Q6UW63 502 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 DHTKD1Q96HY7 919 aaPredicted RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 RBM41Q96IZ5 413 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 MCEEQ96PE7 176 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 FERD3LQ96RJ6 166 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 EIF3CQ99613 913 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 SNRNP25Q9BV90 132 aaKnown RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 VPS16Q9H269 839 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 ETNK2Q9NVF9 386 aa13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 DNMT3AQ9Y6K1 912 aaPredicted RBP13.79□□□□□ -0.2
CHMP2B-205ENST00000494980 A0A0G2JNJ9 132 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 A0A0J9YY10 115 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 RCCD1A6NED2 376 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 MGAT4DA6NG13 374 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 GPR39O43194 453 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 POLBP06746 335 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 SP1P08047 785 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 FILIP1LQ4L180 1135 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 C10orf62Q5T681 223 aaPredicted RBP13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 KAZNQ674X7 775 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 UNC5DQ6UXZ4 953 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 HIPK1Q86Z02 1210 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 LILRA3Q8N6C8 439 aaPredicted RBP13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 PERPQ96FX8 193 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 OR2A14Q96R47 310 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 TFB2MQ9H5Q4 396 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 CWC15Q9P013 229 aaKnown RBP13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 ZNF282Q9UDV7 671 aaPredicted RBP13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 Q9UFV3 132 aa13.78□□□□□ -0.2
CHMP2B-205ENST00000494980 A0A1W2PPR1 153 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 PRPSAP2O60256 369 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 CNOT4O95628 575 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 CYP1A1P04798 512 aaPredicted RBP13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 ICAM2P13598 275 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 MX2P20592 715 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 EMP2P54851 167 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 OC90Q02509 493 aaPredicted RBP13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 NIPAL4Q0D2K0 466 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 POU4F3Q15319 338 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 GPRC6AQ5T6X5 926 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 HEPHL1Q6MZM0 1159 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 SARM1Q6SZW1 724 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 DET1Q7L5Y6 550 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 ARRDC2Q8TBH0 407 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 NAT14Q8WUY8 206 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 ZNF354BQ96LW1 612 aa13.77□□□□□ -0.21
CHMP2B-205ENST00000494980 PEBP4Q96S96 227 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms