RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PNLIP	P16233	465 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	GLB1	P16278	677 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	IMPDH1	P20839	514 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	PKLR	P30613	574 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	GPR3	P46089	330 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	PNLIPRP1	P54315	467 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	BNIP3	Q12983	259 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	MPP2	Q14168	576 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	PDK4	Q16654	411 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	CYP2A13	Q16696	494 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-231	ENST00000494973	DUS1L	Q6P1R4	473 aa	Known RBP	13.15	□□□□□ -0.3
APTX-231	ENST00000494973	AGTRAP	Q6RW13	159 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	TMEM26	Q6ZUK4	368 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	ARL14	Q8N4G2	192 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	OR52E1	Q8NGJ3	308 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	OR2L8	Q8NGY9	312 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	OR56A3	Q8NH54	315 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	LCN9	Q8WX39	176 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	SLC38A3	Q99624	504 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	HAUS8	Q9BT25	410 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	SRMS	Q9H3Y6	488 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	EML4	Q9HC35	981 aa	Known RBP	13.15	□□□□□ -0.3
APTX-231	ENST00000494973	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-231	ENST00000494973	OGFR	Q9NZT2	677 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	SIRPG	Q9P1W8	387 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	OPTC	Q9UBM4	332 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	ANGPTL3	Q9Y5C1	460 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	ENTPD2	Q9Y5L3	495 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	MUC6	Q6W4X9	2439 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973		K7EPI3	171 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	NPHS1	O60500	1241 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	MLYCD	O95822	493 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	EML2	O95834	649 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	RPS17	P08708	135 aa	Known RBP	13.14	□□□□□ -0.31
APTX-231	ENST00000494973	KCNA4	P22459	653 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	IMPA1	P29218	277 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	ALDH3A1	P30838	453 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	SLC6A12	P48065	614 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	ATP1A2	P50993	1020 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	WDR4	P57081	412 aa	Known RBP	13.14	□□□□□ -0.31
APTX-231	ENST00000494973	SPEM2	Q0P670	501 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	PRKAA1	Q13131	559 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	PRKG2	Q13237	762 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	AASDH	Q4L235	1098 aa	Predicted RBP	13.14	□□□□□ -0.31
APTX-231	ENST00000494973	AMIGO1	Q86WK6	493 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	OOSP2	Q86WS3	158 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	C10orf107	Q8IVU9	208 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	CHCHD4	Q8N4Q1	142 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	KY	Q8NBH2	561 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	LRRC8C	Q8TDW0	803 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	ZNF480	Q8WV37	535 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	PHF21B	Q96EK2	531 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	CNDP1	Q96KN2	507 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	MAGEB18	Q96M61	343 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	CD244	Q9BZW8	370 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	SLC32A1	Q9H598	525 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	IL21R	Q9HBE5	538 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	FSCN3	Q9NQT6	498 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	GPRC5B	Q9NZH0	403 aa		13.14	□□□□□ -0.31
APTX-231	ENST00000494973	SUPT7L	O94864	414 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	EPB42	P16452	691 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	HRH2	P25021	359 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	EEF1D	P29692	281 aa	Known RBP	13.13	□□□□□ -0.31
APTX-231	ENST00000494973	KCNC1	P48547	511 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	TBPL1	P62380	186 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	GPLD1	P80108	840 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	ABAT	P80404	500 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	GALNT1	Q10472	559 aa	Predicted RBP	13.13	□□□□□ -0.31
APTX-231	ENST00000494973	GPR18	Q14330	331 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	GRB7	Q14451	532 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	KIR2DS3	Q14952	304 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	NR1D2	Q14995	579 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	CCDC6	Q16204	474 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	CLPP	Q16740	277 aa	Predicted RBP	13.13	□□□□□ -0.31
APTX-231	ENST00000494973	ZNF678	Q5SXM1	525 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	TCEAL6	Q6IPX3	200 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	ARMC6	Q6NXE6	501 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	PRR23C	Q6ZRP0	262 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	RGS9BP	Q6ZS82	235 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	ZNF438	Q7Z4V0	828 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	GATAD2A	Q86YP4	633 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	SLC35F3	Q8IY50	421 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	AFAP1L2	Q8N4X5	818 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	OR10G6	Q8NH81	332 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	MDM1	Q8TC05	714 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	SETD7	Q8WTS6	366 aa	Known RBP	13.13	□□□□□ -0.31
APTX-231	ENST00000494973	TCEAL3	Q969E4	200 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	MED8	Q96G25	268 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	DPYSL5	Q9BPU6	564 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	C12orf65	Q9H3J6	166 aa	Known RBP	13.13	□□□□□ -0.31
APTX-231	ENST00000494973	DNAJC11	Q9NVH1	559 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	PADI4	Q9UM07	663 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	ICK	Q9UPZ9	632 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	DYRK1B	Q9Y463	629 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	KCNE2	Q9Y6J6	123 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	GPR179	Q6PRD1	2367 aa		13.13	□□□□□ -0.31
APTX-231	ENST00000494973	ADAMTS9	Q9P2N4	1935 aa		13.12	□□□□□ -0.31
APTX-231	ENST00000494973	COL5A1	P20908	1838 aa	Predicted RBP	13.12	□□□□□ -0.31
APTX-231	ENST00000494973	C2orf74	A8MZ97	194 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms