RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 USP1O94782 785 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 PTPN4P29074 926 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 PTK6Q13882 451 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 LONRF1Q17RB8 773 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 LCN10Q6JVE6 187 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 ZNF517Q6ZMY9 492 aaPredicted RBP32.02■■■□□ 2.72
CBX4-203ENST00000494546 ZBTB2Q8N680 514 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 SLC22A18Q96BI1 424 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 RAB11FIP5Q9BXF6 653 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 FBXO6Q9NRD1 293 aaPredicted RBP32.02■■■□□ 2.72
CBX4-203ENST00000494546 PCMTD2Q9NV79 361 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 POLHQ9Y253 713 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 FARSAQ9Y285 508 aaKnown RBP32.02■■■□□ 2.72
CBX4-203ENST00000494546 KLHL20Q9Y2M5 609 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 DNALI1O14645 258 aaPredicted RBP32.01■■■□□ 2.71
CBX4-203ENST00000494546 OR2B3O76000 313 aa32.01■■■□□ 2.71
CBX4-203ENST00000494546 MAGP20916 626 aa32.01■■■□□ 2.71
CBX4-203ENST00000494546 RORAP35398 523 aa32.01■■■□□ 2.71
CBX4-203ENST00000494546 CCSMST1Q4G0I0 132 aa32.01■■■□□ 2.71
CBX4-203ENST00000494546 PAPD7Q5XG87 772 aaKnown RBP32.01■■■□□ 2.71
CBX4-203ENST00000494546 KLHL7Q8IXQ5 586 aa32.01■■■□□ 2.71
CBX4-203ENST00000494546 NAPGQ99747 312 aaPredicted RBP32.01■■■□□ 2.71
CBX4-203ENST00000494546 CHRNA10Q9GZZ6 450 aa32.01■■■□□ 2.71
CBX4-203ENST00000494546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP32.01■■■□□ 2.71
CBX4-203ENST00000494546 HEMK1Q9Y5R4 338 aaPredicted RBP32.01■■■□□ 2.71
CBX4-203ENST00000494546 KRT87PA6NCN2 255 aa32■■■□□ 2.71
CBX4-203ENST00000494546 CCNFP41002 786 aa32■■■□□ 2.71
CBX4-203ENST00000494546 GABRA4P48169 554 aa32■■■□□ 2.71
CBX4-203ENST00000494546 NFKB2Q00653 900 aa32■■■□□ 2.71
CBX4-203ENST00000494546 GBX1Q14549 363 aa32■■■□□ 2.71
CBX4-203ENST00000494546 PTCHD3Q3KNS1 767 aa32■■■□□ 2.71
CBX4-203ENST00000494546 SYTL1Q8IYJ3 562 aa32■■■□□ 2.71
CBX4-203ENST00000494546 RAB42Q8N4Z0 105 aa32■■■□□ 2.71
CBX4-203ENST00000494546 SLCO2A1Q92959 643 aa32■■■□□ 2.71
CBX4-203ENST00000494546 SPRTNQ9H040 489 aaPredicted RBP32■■■□□ 2.71
CBX4-203ENST00000494546 IRAK4Q9NWZ3 460 aa32■■■□□ 2.71
CBX4-203ENST00000494546 TUBD1Q9UJT1 453 aa32■■■□□ 2.71
CBX4-203ENST00000494546 KCNMB2Q9Y691 235 aa32■■■□□ 2.71
CBX4-203ENST00000494546 CFAP46Q8IYW2 2715 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 SPTBP11277 2137 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 RECKO95980 971 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 ATP5DP30049 168 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 SLC1A2P43004 574 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 PTGIRP43119 386 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 SF1Q15637 639 aaKnown RBP31.99■■■□□ 2.71
CBX4-203ENST00000494546 ACSBG2Q5FVE4 666 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 IZUMO3Q5VZ72 239 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 PRICKLE2Q7Z3G6 844 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 PCGF5Q86SE9 256 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 CREG2Q8IUH2 290 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 SERBP1Q8NC51 408 aaKnown RBP eCLIP31.99■■■□□ 2.71
CBX4-203ENST00000494546 MAGEC3Q8TD91 643 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 CCDC68Q9H2F9 335 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 SAR1BQ9Y6B6 198 aa31.99■■■□□ 2.71
CBX4-203ENST00000494546 SLC28A2O43868 658 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 HBQ1P09105 142 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 SYVN1Q86TM6 617 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 DNAJC22Q8N4W6 341 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 ENDOVQ8N8Q3 282 aaKnown RBP31.98■■■□□ 2.71
CBX4-203ENST00000494546 CALML6Q8TD86 181 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 SEC14L1Q92503 715 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 PLCL2Q9UPR0 1127 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 FAM169AQ9Y6X4 670 aa31.98■■■□□ 2.71
CBX4-203ENST00000494546 BANF1O75531 89 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 MATN4O95460 622 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 CTSBP07858 339 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 PGAM1P18669 254 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 DHX9Q08211 1270 aaKnown RBP31.97■■■□□ 2.71
CBX4-203ENST00000494546 HSP90AA5PQ58FG0 334 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 LMNTD2Q8IXW0 634 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 INTS7Q9NVH2 962 aaKnown RBP31.97■■■□□ 2.71
CBX4-203ENST00000494546 MAN2B2Q9Y2E5 1009 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 AP1M2Q9Y6Q5 423 aa31.97■■■□□ 2.71
CBX4-203ENST00000494546 BAHCC1Q9P281 2608 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 RAB40ALP0C0E4 278 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 UGT8Q16880 541 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 KLHL38Q2WGJ6 581 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 ZNF549Q6P9A3 640 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 KCNMB4Q86W47 210 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 ZNF655Q8N720 491 aaPredicted RBP31.96■■■□□ 2.71
CBX4-203ENST00000494546 C9orf43Q8TAL5 461 aaPredicted RBP31.96■■■□□ 2.71
CBX4-203ENST00000494546 SLC30A3Q99726 388 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 FAM167BQ9BTA0 163 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 NLNQ9BYT8 704 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 IARS2Q9NSE4 1012 aaKnown RBP31.96■■■□□ 2.71
CBX4-203ENST00000494546 FBXO5Q9UKT4 447 aa31.96■■■□□ 2.71
CBX4-203ENST00000494546 ZNF462Q96JM2 2506 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 H3BMH7 237 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 ZSCAN9O15535 394 aaPredicted RBP31.95■■■□□ 2.71
CBX4-203ENST00000494546 ATXN8OSP0DMR3 200 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 AGXTP21549 392 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 CLCN7P51798 805 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 MPP1Q00013 466 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 DR1Q01658 176 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 IL10RAQ13651 578 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 CRYMQ14894 314 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 TTLL9Q3SXZ7 439 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 C1orf189Q5VU69 101 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 FAM198BQ6UWH4 519 aa31.95■■■□□ 2.71
CBX4-203ENST00000494546 DENND1AQ8TEH3 1009 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms