RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 KIR2DS5Q14953 304 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 CDO1Q16878 200 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 FUT11Q495W5 492 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 STXBP5Q5T5C0 1151 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 KRT39Q6A163 491 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 FAM109BQ6ICB4 259 aaPredicted RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 TMEM211Q6ICI0 200 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF449Q6P9G9 518 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 FAM198BQ6UWH4 519 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 RAD9BQ6WBX8 426 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 PPP1R21Q6ZMI0 780 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 C15orf39Q6ZRI6 1047 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF534Q76KX8 674 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ABI3BPQ7Z7G0 1075 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 DSG4Q86SJ6 1040 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 TUSC5Q8IXB3 177 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF619Q8N2I2 560 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 GBGT1Q8N5D6 347 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 WDSUB1Q8N9V3 476 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 PAPD5Q8NDF8 572 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 SLC24A4Q8NFF2 622 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 OR52I2Q8NH67 350 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 TAS1R2Q8TE23 839 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ROBO4Q8WZ75 1007 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 PDLIM5Q96HC4 596 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 OXNAD1Q96HP4 312 aaPredicted RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 GFI1Q99684 422 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 TRMT61BQ9BVS5 477 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ACAT2Q9BWD1 397 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 FAM129AQ9BZQ8 928 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 PPIL3Q9H2H8 161 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 MMADHCQ9H3L0 296 aaPredicted RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 BICC1Q9H694 974 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 CNOT10Q9H9A5 744 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 APOBEC3GQ9HC16 384 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 EQTNQ9NQ60 294 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ZFP57Q9NU63 452 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ABCB8Q9NUT2 735 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 PRMT7Q9NVM4 692 aaPredicted RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 TAS2R14Q9NYV8 317 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ERAP1Q9NZ08 941 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 COQ3Q9NZJ6 369 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 KLHL9Q9P2J3 617 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ERRFI1Q9UJM3 462 aaPredicted RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ODF2LQ9ULJ1 636 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 ISY1Q9ULR0 285 aaKnown RBP2.24□□□□□ -2.05
LMNB1-207ENST00000494185 NME7Q9Y5B8 376 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 PCDHGA5Q9Y5G8 931 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 SCN5AQ14524 2016 aa2.24□□□□□ -2.05
LMNB1-207ENST00000494185 SPAG9O60271 1321 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 A0A1W2PPM1 405 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SLC33A1O00400 549 aaPredicted RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 PLK4O00444 970 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 PTGESO14684 152 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 GRID2O43424 1007 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ZBTB14O43829 449 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 XPNPEP2O43895 674 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 KINO60870 393 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 DIAPH2O60879 1101 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 TOMM70O94826 608 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 OLFM2O95897 454 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 TFAP2AP05549 437 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 KRT19P08727 400 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 DANCRP0C864 163 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 IL10P22301 178 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 PTPN3P26045 913 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 NMBRP28336 390 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 CDC25CP30307 473 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ARCN1P48444 511 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 KHKP50053 298 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF75DP51815 510 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 PDX1P52945 283 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 CDH13P55290 713 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SNU13P55769 128 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ERVK11-1P61568 191 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ASIC1P78348 528 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ARF5P84085 180 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 RBPJQ06330 500 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ACTN3Q08043 901 aaPredicted RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ACSM1Q08AH1 577 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ARL16Q0P5N6 197 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 HSPB3Q12988 150 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 MFAP5Q13361 173 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 RRS1Q15050 365 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 VWC2Q2TAL6 325 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 FAM98BQ52LJ0 330 aaKnown RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 RAB6CQ53S08 254 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 ZNF789Q5FWF6 425 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 CEP85LQ5SZL2 805 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 GCNT6Q5T4J0 391 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 FAM91A1Q658Y4 838 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 KLC3Q6P597 504 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 TEX38Q6PEX7 206 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 C11orf57Q6ZUT1 292 aaPredicted RBP2.23□□□□□ -2.05
LMNB1-207ENST00000494185 DET1Q7L5Y6 550 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 NUP54Q7Z3B4 507 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 HOOK3Q86VS8 718 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 SYCP3Q8IZU3 236 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 STPG4Q8N801 248 aa2.23□□□□□ -2.05
LMNB1-207ENST00000494185 NIPA2Q8N8Q9 360 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms