RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 BRAT1Q6PJG6 821 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 C6orf89Q6UWU4 347 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 FRRS1Q6ZNA5 592 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 CCDC36Q8IYA8 594 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF570Q96NI8 536 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 WDR26Q9H7D7 661 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 GDAP2Q9NXN4 497 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 STYXL1Q9Y6J8 313 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 ARPC2O15144 300 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 CSKP41240 450 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 SLC13A2Q13183 592 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 HCAR2Q8TDS4 363 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 COPS4Q9BT78 406 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PPM1HQ9ULR3 514 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 INSL6Q9Y581 213 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 AHSGP02765 367 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PGRP06401 933 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 SLC10A7Q0GE19 358 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 PRR23BQ6ZRT6 265 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 NUDT13Q86X67 352 aa18.76■□□□□ 0.59
COL27A1-207ENST00000494090 A0A0X1KG70 313 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 RLN1P04808 185 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 CD2P06729 351 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF823P16415 610 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 RPL17P18621 184 aaKnown RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 CCR8P51685 355 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF433Q8N7K0 673 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 TUBGCP5Q96RT8 1024 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ZSCAN5AQ9BUG6 496 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ANKHQ9HCJ1 492 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 PAPSS2O95340 614 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 MYCLP1P12525 358 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 PRPS1L1P21108 318 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 AP1S2P56377 157 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 NFKB2Q00653 900 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF33AQ06730 810 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 KLF1Q13351 362 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 TCEAL6Q6IPX3 200 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 CXorf57Q6NSI4 855 aaKnown RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 GDPD4Q6W3E5 623 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 CANT1Q8WVQ1 401 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 C11orf24Q96F05 449 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 OR2AG1Q9H205 316 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 YIPF1Q9Y548 306 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 PCDHGB7Q9Y5F8 929 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ENPP3O14638 875 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ANXA8P13928 327 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 INCA1Q0VD86 236 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 SLC30A6Q6NXT4 461 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 CNKSR3Q6P9H4 555 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 FRMD7Q6ZUT3 714 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 FATE1Q969F0 183 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 MATN2O00339 956 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 GATBO75879 557 aaKnown RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 IL7RP16871 459 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 MPIP34949 423 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 CLCN7P51798 805 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 MBLAC2Q68D91 279 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ALKBH2Q6NS38 261 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 SHISA4Q96DD7 197 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 RPL10LQ96L21 214 aaKnown RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF304Q9HCX3 659 aa18.75■□□□□ 0.59
COL27A1-207ENST00000494090 DNAAF2Q9NVR5 837 aaKnown RBP18.75■□□□□ 0.59
COL27A1-207ENST00000494090 FAM25EA8MYX2 175 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 NRP1O14786 923 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 SIX3O95343 332 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-207ENST00000494090 GPM6BQ13491 265 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 TBC1D25Q3MII6 688 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 TNFAIP8L3Q5GJ75 292 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 FBXL22Q6P050 247 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 USP43Q70EL4 1123 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 UTS2BQ765I0 119 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 CCDC80Q76M96 950 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 TSTD1Q8NFU3 115 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 C11orf49Q9H6J7 331 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 IL36AQ9UHA7 158 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF487B1APH4 448 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 NIPSNAP2O75323 286 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 PRAMEF12O95522 483 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 RAB15P59190 212 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 GALNT2Q10471 571 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 C11orf16Q9NQ32 467 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 TRPV5Q9NQA5 729 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 ALPPP05187 535 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 GHRHRQ02643 423 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 KLHL22Q53GT1 634 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 SPATA9Q9BWV2 254 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 ERVK-11Q9UQG0 969 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 C9IYK1 514 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 POU2F1P14859 743 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 KCNE1P15382 129 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 CKMT2P17540 419 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 GJA9P57773 515 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 USP30Q70CQ3 517 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 ABHD13Q7L211 337 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 HIST1H2AAQ96QV6 131 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 CGREF1Q99674 301 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 USP29Q9HBJ7 922 aa18.74■□□□□ 0.59
COL27A1-207ENST00000494090 TMA7Q9Y2S6 64 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms