RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 POT1Q9NUX5 634 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 THAP1Q9NVV9 213 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 OPTCQ9UBM4 332 aa11.07□□□□□ -0.64
MCF2L-231ENST00000494043 KNL1Q8NG31 2342 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 TRBV23OR9-2A0A075B6M9 112 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PRAMEF33A0A0G2JMD5 474 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 GMNCA6NCL1 334 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF839A8K0R7 811 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 K7EPI3 171 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 EDF1O60869 148 aaKnown RBP11.06□□□□□ -0.64
MCF2L-231ENST00000494043 WDR47O94967 919 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SNUPNO95149 360 aaKnown RBP11.06□□□□□ -0.64
MCF2L-231ENST00000494043 VIPP01282 170 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CHRNGP07510 517 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SYPP08247 313 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PKLRP30613 574 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 GDF5P43026 501 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PIK3CGP48736 1102 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 RAB28P51157 221 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SEC24CP53992 1094 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CDH13P55290 713 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CBX1P83916 185 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CLCQ05315 142 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 GALNT1Q10472 559 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-231ENST00000494043 BNIP3Q12983 259 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 LCP2Q13094 533 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 NAE1Q13564 534 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 GTF2H2Q13888 395 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CYP2A13Q16696 494 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 DEFB133Q30KQ1 61 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ARL13AQ5H913 290 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-231ENST00000494043 GTF2H2CQ6P1K8 395 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ATG14Q6ZNE5 492 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 GOLGA7Q7Z5G4 137 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SLC9B2Q86UD5 537 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SFTPA2Q8IWL1 248 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 LRRC56Q8IYG6 542 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SYTL1Q8IYJ3 562 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 LRRC34Q8IZ02 419 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 LSMEM2Q8N112 164 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 RAB42Q8N4Z0 105 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 TEX9Q8N6V9 391 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 AVL9Q8NBF6 648 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PPFIBP2Q8ND30 876 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PRSS33Q8NF86 280 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 OR52E1Q8NGJ3 308 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 MAPK15Q8TD08 544 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ZFPM2Q8WW38 1151 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PYCR2Q96C36 320 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 MED8Q96G25 268 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 IL17FQ96PD4 163 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SGPP1Q9BX95 441 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 C20orf27Q9GZN8 174 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ARRDC1-AS1Q9H2J1 176 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 SLC32A1Q9H598 525 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ZBTB26Q9HCK0 441 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 DNAJC11Q9NVH1 559 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CPNE7Q9UBL6 633 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 LNPEPQ9UIQ6 1025 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 ICKQ9UPZ9 632 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 PCDH15Q96QU1 1955 aa11.06□□□□□ -0.64
MCF2L-231ENST00000494043 CACNA1HO95180 2353 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 E7ENX8 843 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 ARHGAP33O14559 1287 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 NOBOXO60393 691 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 CER1O95813 267 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 MLYCDO95822 493 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 EPB42P16452 691 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 TSPAN8P19075 237 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 SHMT2P34897 504 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 CCT8P50990 548 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 TBPL1P62380 186 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 TAP2Q03519 686 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 TCF15Q12870 199 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 FASTKQ14296 549 aaKnown RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 CAPN13Q6MZZ7 669 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 OGFOD3Q6PK18 319 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 KANSL1Q7Z3B3 1105 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 C17orf82Q86X59 251 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 RBM12BQ8IXT5 1001 aaKnown RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 SLC25A45Q8N413 288 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 OR2L8Q8NGY9 312 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 HMGCLL1Q8TB92 370 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 ZNF382Q96SR6 550 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 NRTNQ99748 197 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 NUSAP1Q9BXS6 441 aaKnown RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 EPN3Q9H201 632 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 XKR8Q9H6D3 395 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 GAREM1Q9H706 876 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 IL21RQ9HBE5 538 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 EML4Q9HC35 981 aaKnown RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 SLC40A1Q9NP59 571 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 SEMA4BQ9NPR2 832 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 CCDC177Q9NQR7 707 aaPredicted RBP11.05□□□□□ -0.64
MCF2L-231ENST00000494043 FGFR1OP2Q9NVK5 253 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 HAO1Q9UJM8 370 aa11.05□□□□□ -0.64
MCF2L-231ENST00000494043 STK38LQ9Y2H1 464 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms