RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ADAM15Q13444 863 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PTGR1Q14914 329 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 TRIP10Q15642 601 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 CPSF6Q16630 551 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 MAP7D1Q3KQU3 841 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SGO1Q5FBB7 561 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 OGFRL1Q5TC84 451 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 FAM46CQ5VWP2 391 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 LPCAT4Q643R3 524 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 GRHL2Q6ISB3 625 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 LCN8Q6JVE9 175 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SLC2A7Q6PXP3 512 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 AGTRAPQ6RW13 159 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ARPINQ7Z6K5 226 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 C11orf96Q7Z7L8 435 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 THOC6Q86W42 341 aaKnown RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SPATA24Q86W54 205 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 HEATR4Q86WZ0 1026 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF547Q8IVP9 402 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 KIAA2013Q8IYS2 634 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 LIX1Q8N485 282 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 DPP10Q8N608 796 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PLA2G15Q8NCC3 412 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SELENOMQ8WWX9 145 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ATL1Q8WXF7 558 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 LRRC58Q96CX6 371 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 DUS3LQ96G46 650 aaKnown RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 MAGEB10Q96LZ2 347 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-208ENST00000494028 OR4K3Q96R72 315 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 PKP4Q99569 1192 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ECSITQ9BQ95 431 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 TRIM8Q9BZR9 551 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 C1orf109Q9NX04 203 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SERGEFQ9UGK8 458 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SNX6Q9UNH7 406 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 SLC22A14Q9Y267 594 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 DOCK9Q9BZ29 2069 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 LRP4O75096 1905 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 TRANK1O15050 2925 aa10.36□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF839A8K0R7 811 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 E7EQ34 232 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 UGDHO60701 494 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ULK1O75385 1050 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 C1orf105O95561 183 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ADH1BP00325 375 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ACPPP15309 386 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 MAP4P27816 1152 aaKnown RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 HALP42357 657 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 KIR2DL1P43626 348 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 GNPDA1P46926 289 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 GSK3BP49841 420 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CCR3P51677 355 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 PCDH1Q08174 1060 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CSTF3Q12996 717 aaKnown RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CHIT1Q13231 466 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 HTR4Q13639 388 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 E2F2Q14209 437 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 AAK1Q2M2I8 961 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 SPATS1Q496A3 300 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 USP39Q53GS9 565 aaKnown RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 SFT2D3Q587I9 215 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 RABL3Q5HYI8 236 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 HABP4Q5JVS0 413 aaKnown RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ATAT1Q5SQI0 421 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 IRAK1BP1Q5VVH5 260 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF776Q68DI1 518 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CES5AQ6NT32 575 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 FAM83HQ6ZRV2 1179 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 PDSS2Q86YH6 399 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 LILRA2Q8N149 483 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 OXR1Q8N573 874 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF513Q8N8E2 541 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 NUDT8Q8WV74 236 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 SLC13A3Q8WWT9 602 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 FAM131CQ96AQ9 280 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ZNF514Q96K75 400 aaPredicted RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CCDC138Q96M89 665 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 RIPOR3Q96MK2 946 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 PKP2Q99959 881 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 TRMT61BQ9BVS5 477 aaKnown RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 MUC13Q9H3R2 512 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 ELOVL6Q9H5J4 265 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CLMPQ9H6B4 373 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 TRIM39Q9HCM9 518 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 CIDEBQ9UHD4 219 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 EIF3LQ9Y262 564 aaKnown RBP10.35□□□□□ -0.75
CLCN6-208ENST00000494028 DLGAP4Q9Y2H0 992 aa10.35□□□□□ -0.75
CLCN6-208ENST00000494028 A0A1W2PP55 124 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 IFRD1O00458 451 aaPredicted RBP10.34□□□□□ -0.75
CLCN6-208ENST00000494028 ARPC2O15144 300 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 SLC16A8O95907 504 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 BCKDHAP12694 445 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 SDC1P18827 310 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 C5AR1P21730 350 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 TEAD1P28347 426 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 MTHFRP42898 656 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 DGKQP52824 942 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 AQP4P55087 323 aa10.34□□□□□ -0.75
CLCN6-208ENST00000494028 SEC13P55735 322 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms