RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TAF13Q15543 124 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 MEP1AQ16819 746 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 CTU2Q2VPK5 515 aaKnown RBP3.49□□□□□ -1.85
SMC4-223ENST00000493695 KLC3Q6P597 504 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 INTS8Q75QN2 995 aaKnown RBP3.49□□□□□ -1.85
SMC4-223ENST00000493695 HPS6Q86YV9 775 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 GUF1Q8N442 669 aaKnown RBP3.49□□□□□ -1.85
SMC4-223ENST00000493695 CCDC89Q8N998 374 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 SYT2Q8N9I0 419 aaPredicted RBP3.49□□□□□ -1.85
SMC4-223ENST00000493695 TMCO6Q96DC7 493 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 USP28Q96RU2 1077 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 MYADMQ96S97 322 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 FUCA2Q9BTY2 467 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 TMX4Q9H1E5 349 aaPredicted RBP3.49□□□□□ -1.85
SMC4-223ENST00000493695 MMP27Q9H306 513 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 RNF186Q9NXI6 227 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 ERAP1Q9NZ08 941 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 MRPL15Q9P015 296 aaKnown RBP3.49□□□□□ -1.85
SMC4-223ENST00000493695 NRBP1Q9UHY1 535 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 MUTYHQ9UIF7 546 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 WDR37Q9Y2I8 494 aa3.49□□□□□ -1.85
SMC4-223ENST00000493695 SYNDIG1LA6NDD5 238 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 ZNF195O14628 629 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 FIBPO43427 364 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 NMBRP28336 390 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 PGFP49763 221 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 LGALS3BPQ08380 585 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 DCAF10Q5QP82 559 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 CFAP58Q5T655 872 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 DHRS7BQ6IAN0 325 aaPredicted RBP3.48□□□□□ -1.85
SMC4-223ENST00000493695 ZNF554Q86TJ5 538 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 LDB1Q86U70 411 aaPredicted RBP3.48□□□□□ -1.85
SMC4-223ENST00000493695 HOGA1Q86XE5 327 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 CEP57Q86XR8 500 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 DNAAF5Q86Y56 855 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 SLC34A3Q8N130 599 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 OR8H2Q8N162 312 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 L3MBTL4Q8NA19 623 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 OR10S1Q8NGN2 331 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 OR4C3Q8NH37 302 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 ERP27Q96DN0 273 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 ARSGQ96EG1 525 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 ABHD1Q96SE0 405 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 DDOQ99489 341 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 HGH1Q9BTY7 390 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 TRIM6Q9C030 488 aaPredicted RBP3.48□□□□□ -1.85
SMC4-223ENST00000493695 DNAJC18Q9H819 358 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 PANK3Q9H999 370 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 LARSQ9P2J5 1176 aaKnown RBP3.48□□□□□ -1.85
SMC4-223ENST00000493695 CHORDC1Q9UHD1 332 aaPredicted RBP3.48□□□□□ -1.85
SMC4-223ENST00000493695 RIPK3Q9Y572 518 aa3.48□□□□□ -1.85
SMC4-223ENST00000493695 TO15178 435 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 TIMM44O43615 452 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 MAGEC1O60732 1142 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 ZSCAN5DPP0CG00 497 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 MMP12P39900 470 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 TMF1P82094 1093 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 NUCB1Q02818 461 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 MELKQ14680 651 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 FAM98BQ52LJ0 330 aaKnown RBP3.47□□□□□ -1.85
SMC4-223ENST00000493695 NAA16Q6N069 864 aaPredicted RBP3.47□□□□□ -1.85
SMC4-223ENST00000493695 HAUS6Q7Z4H7 955 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 PTAR1Q7Z6K3 402 aaPredicted RBP3.47□□□□□ -1.85
SMC4-223ENST00000493695 OR1J1Q8NGS3 322 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 TBC1D16Q8TBP0 767 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 ZFAND2BQ8WV99 257 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 HPSE2Q8WWQ2 592 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 NEK1Q96PY6 1258 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 GCNAQ96QF7 691 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 SLF1Q9BQI6 1058 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 CENPOQ9BU64 300 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 RPP25Q9BUL9 199 aaKnown RBP3.47□□□□□ -1.85
SMC4-223ENST00000493695 MBNL1Q9NR56 388 aaKnown RBP3.47□□□□□ -1.85
SMC4-223ENST00000493695 SPHK2Q9NRA0 654 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 TAB2Q9NYJ8 693 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 THEGQ9P2T0 379 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 HACL1Q9UJ83 578 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 ANAPC2Q9UJX6 822 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 PCDHGA5Q9Y5G8 931 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 FAM169AQ9Y6X4 670 aa3.47□□□□□ -1.85
SMC4-223ENST00000493695 IGKV6D-21A0A0A0MT36 114 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 TCRBV21S2A2A0A5A6 115 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 HEPACAM2A8MVW5 462 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 ATP6V0E1O15342 81 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 P4HA2O15460 535 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 TOMM70O94826 608 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 C22orf31O95567 290 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 DUX4L4P0CJ87 422 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 ACP2P11117 423 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 LIMK2P53671 638 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 PPP2R2BQ00005 443 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 PNRC1Q12796 327 aaPredicted RBP3.46□□□□□ -1.86
SMC4-223ENST00000493695 PLA2G7Q13093 441 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 LACC1Q8IV20 430 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 NIPA2Q8N8Q9 360 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 PAPD5Q8NDF8 572 aaKnown RBP3.46□□□□□ -1.86
SMC4-223ENST00000493695 ERLEC1Q96DZ1 483 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 NSMCE3Q96MG7 304 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 DGAT2Q96PD7 388 aa3.46□□□□□ -1.86
SMC4-223ENST00000493695 CDRT15Q96T59 188 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms