RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TLE6Q9H808 572 aa19.72■□□□□ 0.75
RNF40-203ENST00000493683 CHMP1AQ9HD42 196 aaPredicted RBP19.72■□□□□ 0.75
RNF40-203ENST00000493683 P2RX2Q9UBL9 471 aa19.72■□□□□ 0.75
RNF40-203ENST00000493683 BAZ2BQ9UIF8 2168 aaKnown RBP19.72■□□□□ 0.75
RNF40-203ENST00000493683 CPSF4LA6NMK7 179 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 CLPXO76031 633 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 YAP1P46937 504 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 WDR4P57081 412 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 CMASQ8NFW8 434 aaPredicted RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 FCF1Q9Y324 198 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 ARL5CA6NH57 179 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 LINGO3P0C6S8 592 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 SLC2A2P11168 524 aaPredicted RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 POU2F1P14859 743 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 FLT3LGP49771 235 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 NFKB2Q00653 900 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 SLC9A4Q6AI14 798 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 FAM156AQ8NDB6 213 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 HIST1H2AAQ96QV6 131 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 CGREF1Q99674 301 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 MND1Q9BWT6 205 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 VPS29Q9UBQ0 182 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 DCLK1O15075 740 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 AOC1P19801 751 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 ERVK-21P61565 698 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 PDE12Q6L8Q7 609 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 OR2L3Q8NG85 312 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 CEP76Q8TAP6 659 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 SMG7Q92540 1137 aaKnown RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 SPIN1Q9Y657 262 aaPredicted RBP19.71■□□□□ 0.75
RNF40-203ENST00000493683 SLC38A8A6NNN8 435 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 CLCN7P51798 805 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 TLR1Q15399 786 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 PLPP4Q5VZY2 271 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 CEP68Q76N32 757 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 NCSTNQ92542 709 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 EBF4Q9BQW3 602 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 LRRC42Q9Y546 428 aa19.71■□□□□ 0.75
RNF40-203ENST00000493683 ILVBLA1L0T0 632 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 C9JVG2 144 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 TLR4O00206 839 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 PTPN2P17706 415 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 NDUFS1P28331 727 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 ZNF460Q14592 562 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 PRR23CQ6ZRP0 262 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 CAND1Q86VP6 1230 aaKnown RBP19.71■□□□□ 0.74
RNF40-203ENST00000493683 SPAG16Q8N0X2 631 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 OR51V1Q9H2C8 321 aa19.71■□□□□ 0.74
RNF40-203ENST00000493683 PSKH1P11801 424 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 ZNF3P17036 446 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 ARPC4P59998 168 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 DSTNP60981 165 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 CRB2Q5IJ48 1285 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 POMZP3Q6PJE2 187 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 OR14C36Q8NHC7 312 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 ZDHHC3Q9NYG2 299 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 COMMD3Q9UBI1 195 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 PCDHGB6Q9Y5F9 930 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 RASGRP1O95267 797 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 YES1P07947 543 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 CCR8P51685 355 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 OR2T5Q6IEZ7 315 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 C2orf73Q8N5S3 287 aaPredicted RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 CCDC54Q8NEL0 328 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 OR2T29Q8NH02 315 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 STON2Q8WXE9 905 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 KCTD13Q8WZ19 329 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 KLHL6Q8WZ60 621 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 TUBA1CQ9BQE3 449 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 EIF3KQ9UBQ5 218 aaKnown RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 TREHO43280 583 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 VARS2Q5ST30 1063 aaKnown RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 LGI4Q8N135 537 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 THRSPQ92748 146 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 SRMSQ9H3Y6 488 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 MRPS30Q9NP92 439 aaKnown RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 OSER1Q9NX31 292 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 DUS2Q9NX74 493 aaKnown RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 ACTR3BQ9P1U1 418 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 ASB3Q9Y575 518 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 KANTRA0A1W2PQU2 76 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 FOXO6A8MYZ6 492 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 CSNK2A2P19784 350 aaPredicted RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 CD72P21854 359 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 C1QTNF8P60827 252 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 TXNL4AP83876 142 aaKnown RBP19.7■□□□□ 0.74
RNF40-203ENST00000493683 SLC10A7Q0GE19 358 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 GALNTL5Q7Z4T8 443 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 SLC6A15Q9H2J7 730 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 SEC14L4Q9UDX3 406 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 TMEM131LA2VDJ0 1609 aa19.7■□□□□ 0.74
RNF40-203ENST00000493683 ZNF33AQ06730 810 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 WSCD2Q2TBF2 565 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 TMIEQ8NEW7 156 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 PPP1R13LQ8WUF5 828 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 CD84Q9UIB8 345 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 ARL6IP5O75915 188 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 OR3A3P47888 321 aa19.69■□□□□ 0.74
RNF40-203ENST00000493683 OR3A2P47893 321 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms