RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RCOR2Q8IZ40 523 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 STX19Q8N4C7 294 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 CHDHQ8NE62 594 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SETD6Q8TBK2 473 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ACTL9Q8TC94 416 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ACER1Q8TDN7 264 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 SFT2D1Q8WV19 159 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF300Q96RE9 604 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 BBS4Q96RK4 519 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PARK7Q99497 189 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 MAP3K3Q99759 626 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 GDF15Q99988 308 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 HSD17B14Q9BPX1 270 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 EIF2AK1Q9BQI3 630 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 DHX35Q9H5Z1 703 aaKnown RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 LTB4R2Q9NPC1 389 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 RAB6BQ9NRW1 208 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 KRT84Q9NSB2 600 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 HSPBP1Q9NZL4 362 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 WRAP73Q9P2S5 460 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF112Q9UJU3 913 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 TBC1D24Q9ULP9 559 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 PCDHB12Q9Y5F1 795 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 ALG5Q9Y673 324 aa6.72□□□□□ -1.33
VPS13B-205ENST00000493587 A0A1B0GVM2 712 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 PMS2P1A4D2B8 440 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 TCAF2A6NFQ2 919 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 MFSD2BA6NFX1 497 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 ASB14A6NK59 587 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 SIGLEC6O43699 453 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 EIF3GO75821 320 aaKnown RBP eCLIP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 PSMD10O75832 226 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 RASGRP1O95267 797 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 CALCAP01258 141 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 NUDT7P0C024 238 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 NCK1P16333 377 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 RPL14P50914 215 aaKnown RBP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 P2RY4P51582 365 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 ARSFP54793 590 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 FCGRTP55899 365 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 KLF1Q13351 362 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 KCNC3Q14003 757 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 CAMK1Q14012 370 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 DAG1Q14118 895 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 PTPRCAPQ14761 206 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 GPR19Q15760 415 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 PSMD5Q16401 504 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 QRICH1Q2TAL8 776 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 CLLU1Q5K131 121 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 VASNQ6EMK4 673 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 DARS2Q6PI48 645 aaKnown RBP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 RANBP10Q6VN20 620 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 CHPFQ8IZ52 775 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 DPP10Q8N608 796 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 IL17RCQ8NAC3 791 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 TRMT10AQ8TBZ6 339 aaKnown RBP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 CLEC4DQ8WXI8 215 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 SLC45A3Q96JT2 553 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 OR2A14Q96R47 310 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 UHRF1Q96T88 793 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 WDR18Q9BV38 432 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 RUSC1Q9BVN2 902 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 GSX2Q9BZM3 304 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF358Q9NW07 568 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 NSMCE4AQ9NXX6 385 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 BFARQ9NZS9 450 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 DCDC2Q9UHG0 476 aa6.71□□□□□ -1.33
VPS13B-205ENST00000493587 INTS6Q9UL03 887 aaKnown RBP6.71□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF541Q9H0D2 1346 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TRBV23OR9-2A0A075B6M9 112 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MTMR11A4FU01 709 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TCP10L2B9ZVM9 353 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SLC28A1O00337 649 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 EEF2KO00418 725 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 STX16O14662 325 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SLC16A3O15427 465 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 RGS10O43665 173 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ADAMTS4O75173 837 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PROSCO94903 275 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SLITRK3O94933 977 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 MT-ND2P03891 347 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 HLA-DOAP06340 250 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 APRTP07741 180 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 FPR3P25089 353 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 GMPRP36959 345 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 KCNJ3P48549 501 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 AFF1P51825 1210 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 GDF10P55107 478 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 ADARB1P78563 741 aaKnown RBP6.71□□□□□ -1.34
VPS13B-205ENST00000493587 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SMCO1Q147U7 214 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PYDC2Q56P42 97 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 NOMO2Q5JPE7 1267 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PPM1JQ5JR12 505 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 TRIQKQ629K1 86 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 SMYD5Q6GMV2 418 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 AFTPHQ6ULP2 937 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 NAPRTQ6XQN6 538 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PRSS48Q7RTY5 328 aa6.71□□□□□ -1.34
VPS13B-205ENST00000493587 PIWIL4Q7Z3Z4 852 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms