RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 MAGP20916 626 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 PSMB4P28070 264 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 ACADLP28330 430 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 RBL1P28749 1068 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 NSG1P42857 185 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 ATP5OP48047 213 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 TDGF1P3P51864 188 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 PLOD1Q02809 727 aaPredicted RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 CACNG1Q06432 222 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 MSLNQ13421 630 aaPredicted RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 OLIG2Q13516 323 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 TCTE1Q5JU00 501 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 MTFR2Q6P444 385 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 BNC2Q6ZN30 1099 aaPredicted RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 LINC00696Q6ZRV3 163 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 BBS12Q6ZW61 710 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 COX15Q7KZN9 410 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 TAS2R42Q7RTR8 314 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 LUZP1Q86V48 1076 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 CDKL3Q8IVW4 592 aaPredicted RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 RCOR2Q8IZ40 523 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 TTC29Q8NA56 475 aaPredicted RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 OR11G2Q8NGC1 345 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 OR8K1Q8NGG5 319 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 ELMO1Q92556 727 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 SLC22A18Q96BI1 424 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 DNAJC1Q96KC8 554 aaKnown RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 MAGEB10Q96LZ2 347 aaPredicted RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 LMF1Q96S06 567 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 TBL1YQ9BQ87 522 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 ARNT2Q9HBZ2 717 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 CHST11Q9NPF2 352 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 LUC7LQ9NQ29 371 aaKnown RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 ENAMQ9NRM1 1142 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 CUTCQ9NTM9 273 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 INTS7Q9NVH2 962 aaKnown RBP10.56□□□□□ -0.72
SND1-215ENST00000492772 IL1RAPL1Q9NZN1 696 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 IFNKQ9P0W0 207 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 INTUQ9ULD6 942 aa10.56□□□□□ -0.72
SND1-215ENST00000492772 DCHS2Q6V1P9 2916 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 DYTNA2CJ06 578 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 CCDC78A2IDD5 438 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 GOLGA6L19H0YKK7 550 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 MAP2K7O14733 419 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ZNF189O75820 626 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 USP1O94782 785 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ZRANB2O95218 330 aaKnown RBP eCLIP10.55□□□□□ -0.72
SND1-215ENST00000492772 HPP00738 406 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 TPBGLP0DKB5 382 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ACPPP15309 386 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 FDXRP22570 491 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 PKLRP30613 574 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 CARSP49589 748 aaKnown RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 CDKN1CP49918 316 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 RAB28P51157 221 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 KCNK10P57789 538 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ARG2P78540 354 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ITIH4Q14624 930 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 GRM7Q14831 915 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 DBN1Q16643 649 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ZC3H12BQ5HYM0 836 aaKnown RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 ANKRD20A2Q5SQ80 823 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 CCDC181Q5TID7 509 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ANKRD20A1Q5TYW2 823 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ANKRD20A3Q5VUR7 823 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ZNF324BQ6AW86 544 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 CAVIN1Q6NZI2 390 aaKnown RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 PACS1Q6VY07 963 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 RPTNQ6XPR3 784 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 NLRP9Q7RTR0 991 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 MCATQ8IVS2 390 aaKnown RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 ZNF808Q8N4W9 903 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 OR1N1Q8NGS0 311 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 ITLN2Q8WWU7 325 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 NR4A3Q92570 626 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 LURAP1Q96LR2 239 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 CCDC42Q96M95 316 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 CRB3Q9BUF7 120 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 SOX17Q9H6I2 414 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 SPTLC3Q9NUV7 552 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 NLE1Q9NVX2 485 aaPredicted RBP10.55□□□□□ -0.72
SND1-215ENST00000492772 SMARCAL1Q9NZC9 954 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 CTSFQ9UBX1 484 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 PLAGL1Q9UM63 463 aa10.55□□□□□ -0.72
SND1-215ENST00000492772 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
SND1-215ENST00000492772 TRAV17A0A0B4J275 112 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 SLC5A10A0PJK1 596 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 VSTM2BA6NLU5 285 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 F8W8V4 182 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 KRT38O76015 456 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 S1PR4O95977 384 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 RPN2P04844 631 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 PRSS56P0CW18 603 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 COX6B1P14854 86 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 HADHBP55084 474 aaKnown RBP10.54□□□□□ -0.72
SND1-215ENST00000492772 Q0VFX4 171 aa10.54□□□□□ -0.72
SND1-215ENST00000492772 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.54□□□□□ -0.722e-10■■□□□ 12.6
SND1-215ENST00000492772 DNAJC21Q5F1R6 531 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms