RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SLC32A1Q9H598 525 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 NTN4Q9HB63 628 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 TRPS1Q9UHF7 1281 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 SLC25A13Q9UJS0 675 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PPIL1Q9Y3C6 166 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 A0A1W2PPW3 197 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 MOSPD3O75425 235 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 WDR47O94967 919 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 KCNH1O95259 989 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ATE1O95260 518 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 NPPAP01160 153 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 GSNP06396 782 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PGRP06401 933 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PPM1AP35813 382 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ESRRGP62508 458 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 NKG7Q16617 165 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ZIK1Q3SY52 487 aaPredicted RBP12.54□□□□□ -0.4
PRAME-213ENST00000492657 LY6G5CQ5SRR4 150 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 NCCRP1Q6ZVX7 275 aaPredicted RBP12.54□□□□□ -0.4
PRAME-213ENST00000492657 GPR141Q7Z602 305 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ADIPOR2Q86V24 386 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ANKRD46Q86W74 232 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PROSER1Q86XN7 944 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PACRGLQ8N7B6 248 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 ZNF366Q8N895 744 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 FBXO30Q8TB52 745 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 HM13Q8TCT9 377 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 USP7Q93009 1102 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 MUC13Q9H3R2 512 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 C1orf109Q9NX04 203 aa12.54□□□□□ -0.4
PRAME-213ENST00000492657 PTPRSQ13332 1948 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TTC34A8MYJ7 566 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 C1QCP02747 245 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TYRP14679 529 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 MSH3P20585 1137 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 IST1P53990 364 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 LDLRAP1Q5SW96 308 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TMTC4Q5T4D3 741 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 PLPP4Q5VZY2 271 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 GDPD4Q6W3E5 623 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 UTS2BQ765I0 119 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 SNX29P2Q8IUI4 249 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 BPIFB1Q8TDL5 484 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 SELENOMQ8WWX9 145 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 ASB11Q8WXH4 323 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 GFM2Q969S9 779 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 PAWRQ96IZ0 340 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 TSSK3Q96PN8 268 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 OR52E6Q96RD3 313 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 CPEB1Q9BZB8 566 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 FAIMQ9NVQ4 179 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 IGLV3-16A0A075B6K0 115 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 A0A087WXM4 84 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 DYTNA2CJ06 578 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 LRATO95237 230 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 ANXA6P08133 673 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 UMPSP11172 480 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 GGT1P19440 569 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 ETV3P41162 512 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TUBA4AP68366 448 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 PPP1R8Q12972 351 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 BNIP3Q12983 259 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 PLCL1Q15111 1095 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 SLC36A3Q495N2 470 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 CACHD1Q5VU97 1274 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 METTL3Q86U44 580 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 ITFG1Q8TB96 612 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 IRF7Q92985 503 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 ZSWIM3Q96MP5 696 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 PARVBQ9HBI1 364 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 HPS4Q9NQG7 708 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
PRAME-213ENST00000492657 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
PRAME-213ENST00000492657 UNC80Q8N2C7 3258 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 OR2AG2A6NM03 316 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 UPK1AO00322 258 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 CLOCKO15516 846 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 ADAM23O75077 832 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 TIMP1P01033 207 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 ADH1AP07327 375 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 FCGR1AP12314 374 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms