RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 LONRF1Q17RB8 773 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 DUOXA1Q1HG43 343 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SMTNL2Q2TAL5 461 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 BEAN1Q3B7T3 259 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PLK5Q496M5 336 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CCDC38Q502W7 563 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ALFQ53S48 1182 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 INO80DQ53TQ3 878 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CMPK2Q5EBM0 449 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 UBAP2Q5T6F2 1119 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 DAB2IPQ5VWQ8 1189 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PMS2CLQ68D20 193 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TMEM215Q68D42 235 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CXorf57Q6NSI4 855 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 IL27RAQ6UWB1 636 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RFX8Q6ZV50 586 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RHOUQ7L0Q8 258 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 BNIPLQ7Z465 357 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 C14orf80Q86SX3 495 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D1Q86TI0 1168 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TTC7BQ86TV6 843 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CCDC25Q86WR0 208 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CACUL1Q86Y37 369 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MMAAQ8IVH4 418 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SFTPA1Q8IWL2 248 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 APCDD1Q8J025 514 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 NDUFAF2Q8N183 169 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 UMODL1-AS1Q8N2C9 162 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 HDDC3Q8N4P3 179 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ATPAF2Q8N5M1 289 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SUMF1Q8NBK3 374 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CPEB3Q8NE35 698 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TMIEQ8NEW7 156 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 OR56A1Q8NGH5 318 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CFAP61Q8NHU2 1237 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 AGAP11Q8TF27 550 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RLN3Q8WXF3 142 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PIGKQ92643 395 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PMM1Q92871 262 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 KLHL29Q96CT2 875 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 STAMBPL1Q96FJ0 436 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TEKT5Q96M29 485 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RAB3IPQ96QF0 476 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 HEPHQ9BQS7 1158 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SNRNP25Q9BV90 132 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CINPQ9BW66 212 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 GPR174Q9BXC1 333 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 C1QTNF7Q9BXJ2 289 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 C11orf54Q9H0W9 315 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ARRDC1-AS1Q9H2J1 176 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ZNF768Q9H5H4 540 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PPCSQ9HAB8 311 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PRSS16Q9NQE7 514 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 FGFR1OP2Q9NVK5 253 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 NKIRAS1Q9NYS0 192 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 UBA2Q9UBT2 640 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 IL36AQ9UHA7 158 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ASIC3Q9UHC3 531 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 VPS51Q9UID3 782 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SLCO3A1Q9UIG8 710 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CLEC4EQ9ULY5 219 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 NEU2Q9Y3R4 380 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CELSR3Q9NYQ7 3312 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 COL12A1Q99715 3063 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 SPAG17Q6Q759 2223 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 COL4A2P08572 1712 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3DA0A087WVF3 549 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3IA0A087WXS9 549 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3EA0A087X179 549 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3KA0A087X1G2 549 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 IGHV1OR15-9A0A0B4J2B8 117 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 A0A0D9SEW6 157 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 A0A1B0GTW7 788 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 A0A1W2PQ67 120 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 BCLAF3A2AJT9 711 aaKnown RBP4.66□□□□□ -1.66
CSTF1-205ENST00000490539 LRRD1A4D1F6 860 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3FA6NER0 549 aaPredicted RBP4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3LB9A6J9 549 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 RASA4BC9J798 803 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 NDC80O14777 642 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 DCLK1O15075 740 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 PRPF4O43172 522 aaKnown RBP eCLIP4.66□□□□□ -1.66
CSTF1-205ENST00000490539 RASA4O43374 803 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 PSTPIP1O43586 416 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 ERN1O75460 977 aaKnown RBP4.66□□□□□ -1.66
CSTF1-205ENST00000490539 UNC5CO95185 931 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 EPN2O95208 641 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 ACSL3O95573 720 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 GPANK1O95872 356 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 GSRP00390 522 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TBC1D3HP0C7X1 549 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 ZNF806P0C7X5 589 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 SRCP12931 536 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 PLA2G2AP14555 144 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 BRAFP15056 766 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 ERCC2P18074 760 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 TAC1P20366 129 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 FPR1P21462 350 aa4.66□□□□□ -1.66
CSTF1-205ENST00000490539 NR4A1P22736 598 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms