RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PCK1P35558 622 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 HMGCLP35914 325 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 SPAM1P38567 509 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 RAB28P51157 221 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ZNF33BQ06732 778 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ZBTB17Q13105 803 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 PAFAH1B3Q15102 231 aaKnown RBP13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 NOMO1Q15155 1222 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ATP13A4Q4VNC1 1196 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ABHD17BQ5VST6 288 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 UNC5AQ6ZN44 842 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ARHGEF18Q6ZSZ5 1173 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 NEK10Q6ZWH5 1172 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 NLRP9Q7RTR0 991 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 SIAH3Q8IW03 269 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 STT3BQ8TCJ2 826 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 STMN3Q9NZ72 180 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 RNF6Q9Y252 685 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 KLHL20Q9Y2M5 609 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 ASB1Q9Y576 335 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
EXOSC3-207ENST00000490516 PHF3Q92576 2039 aaKnown RBP13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 GLYATL1P3A0A0U1RQE8 302 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 BUD23O43709 281 aaKnown RBP13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 SGTAO43765 313 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 CHRM5P08912 532 aaPredicted RBP13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 ZGLP1P0C6A0 271 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 FANCCQ00597 558 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 KRT81Q14533 505 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 EID3Q8N140 333 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 ACRBPQ8NEB7 543 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 ASB5Q8WWX0 329 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 HDAC10Q969S8 669 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 MIEF2Q96C03 454 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 MBD6Q96DN6 1003 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 IMP4Q96G21 291 aaKnown RBP13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 PWWP2AQ96N64 755 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 FRMD6Q96NE9 622 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 OR52A5Q9H2C5 316 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 CLEC4MQ9H2X3 399 aaPredicted RBP13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 TAB2Q9NYJ8 693 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 HRH3Q9Y5N1 445 aa13.05□□□□□ -0.32
EXOSC3-207ENST00000490516 IGHV1-45A0A0A0MS14 117 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 KLHL33A6NCF5 533 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 ASPDHA6ND91 283 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 PDHA2P29803 388 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 CHRNB4P30926 498 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 ITGA9Q13797 1035 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 BCL7AQ4VC05 210 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 RIPOR1Q6ZS17 1223 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 CCDC71Q8IV32 467 aaPredicted RBP13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 ZZZ3Q8IYH5 903 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 CCNYQ8ND76 341 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 SPATA22Q8NHS9 363 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 HM13Q8TCT9 377 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 DTX3LQ8TDB6 740 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 DENND1AQ8TEH3 1009 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 LINC00615Q96LM1 132 aaPredicted RBP13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 SIGLEC12Q96PQ1 595 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 IL17CQ9P0M4 197 aa13.04□□□□□ -0.32
EXOSC3-207ENST00000490516 IFRD1O00458 451 aaPredicted RBP13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 KLK8O60259 260 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 MED26O95402 600 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 NDST3O95803 873 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 MAGP20916 626 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 HOXC12P31275 282 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 ARSEP51690 589 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 YBX1P67809 324 aaKnown RBP13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 GBE1Q04446 702 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 OCA2Q04671 838 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 SLC10A2Q12908 348 aaPredicted RBP13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 BOP1Q14137 746 aaKnown RBP13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 CCDC183Q5T5S1 534 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 CAMKMTQ7Z624 323 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 ZNF395Q9H8N7 513 aaPredicted RBP13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 SMOXQ9NWM0 555 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 ANKRD10Q9NXR5 420 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 L3MBTL1Q9Y468 752 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 TLN2Q9Y4G6 2542 aa13.03□□□□□ -0.32
EXOSC3-207ENST00000490516 TPBGLP0DKB5 382 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 CXCR2P25025 360 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 PEBP1P30086 187 aaKnown RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 SLC25A11Q02978 314 aaKnown RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 SNTB1Q13884 538 aaKnown RBP13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 PTPRCAPQ14761 206 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 DEFB113Q30KQ7 82 aa13.02□□□□□ -0.33
EXOSC3-207ENST00000490516 TCP11X2Q5H9J9 407 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms