RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GBAP04062 536 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 NTRK1P04629 796 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 UMPSP11172 480 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 RPS14P62263 151 aaKnown RBP15.32■□□□□ 0.04
BRD9-208ENST00000489816 PON2Q15165 354 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 CCSMST1Q4G0I0 132 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 KCTD21Q4G0X4 260 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 GPR180Q86V85 440 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 OVCA2Q8WZ82 227 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 SDCCAG3Q96C92 435 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 SLC46A2Q9BY10 475 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 AMBRA1Q9C0C7 1298 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 PAIP1Q9H074 479 aaKnown RBP15.32■□□□□ 0.04
BRD9-208ENST00000489816 PCDH12Q9NPG4 1184 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 TMPRSS11EQ9UL52 423 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 PPT2Q9UMR5 302 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 H3BMQ9 156 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 TGM5O43548 720 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 XPNPEP2O43895 674 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 TUBA4AP68366 448 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 ADARB1P78563 741 aaKnown RBP15.32■□□□□ 0.04
BRD9-208ENST00000489816 KCNAB2Q13303 367 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 ZNF621Q6ZSS3 439 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 RBM23Q86U06 439 aaKnown RBP15.32■□□□□ 0.04
BRD9-208ENST00000489816 TCEAL4Q96EI5 215 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 COG8Q96MW5 612 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 HTATIP2Q9BUP3 242 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 SUV39H2Q9H5I1 410 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 DNMT3BQ9UBC3 853 aaKnown RBP15.32■□□□□ 0.04
BRD9-208ENST00000489816 HCFC2Q9Y5Z7 792 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 DGKBQ9Y6T7 804 aa15.32■□□□□ 0.04
BRD9-208ENST00000489816 REV3LO60673 3130 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 XYLBO75191 536 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 CREG1O75629 220 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 HIST1H2AGP0C0S8 130 aaPredicted RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 HIST1H2ADP20671 130 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 NSG1P42857 185 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 PREPP48147 710 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 ALDH3A2P51648 485 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 DCTN2Q13561 401 aaKnown RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 CBX2Q14781 532 aaPredicted RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 TTLL9Q3SXZ7 439 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 BORAQ6PGQ7 559 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 OTOP2Q7RTS6 562 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 ZNF551Q7Z340 670 aaPredicted RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 HIST1H2AHQ96KK5 128 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 HIST1H2AJQ99878 128 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 H2AFJQ9BTM1 129 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 ARNTLO00327 626 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 RFPL2O75678 378 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 KRT6AP02538 564 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 KRT6BP04259 564 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 PSMA3P25788 255 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 CCR2P41597 374 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 KRT6CP48668 564 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 LSM3P62310 102 aaKnown RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 USP39Q53GS9 565 aaKnown RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 GRAMD4Q6IC98 578 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 ZCCHC8Q6NZY4 707 aaKnown RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 Q6ZNB5 142 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 VTCN1Q7Z7D3 282 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 CLECL1Q8IZS7 167 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 PAPD5Q8NDF8 572 aaKnown RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 KIAA1522Q9P206 1035 aaPredicted RBP15.31■□□□□ 0.04
BRD9-208ENST00000489816 KNL1Q8NG31 2342 aa15.31■□□□□ 0.04
BRD9-208ENST00000489816 J3QRK9 145 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 PER2O15055 1255 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 PRSS23O95084 383 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 FTH1P02794 183 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 ABCB1P08183 1280 aaPredicted RBP15.3■□□□□ 0.04
BRD9-208ENST00000489816 ETV3P41162 512 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 CHIT1Q13231 466 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 ZNF697Q5TEC3 545 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 TPGS2Q68CL5 300 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 FAM180BQ6P0A1 224 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 ZC3H7AQ8IWR0 971 aaKnown RBP15.3■□□□□ 0.04
BRD9-208ENST00000489816 GPR156Q8NFN8 814 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 CNIH3Q8TBE1 160 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 ELMO1Q92556 727 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 ACDQ96AP0 544 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 FBXL8Q96CD0 374 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 SLC32A1Q9H598 525 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 VNN3Q9NY84 501 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 ERVK-11Q9UQG0 969 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 PABPN1LA6NDY0 278 aaKnown RBP15.3■□□□□ 0.04
BRD9-208ENST00000489816 LEFTY2O00292 366 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 SLC28A1O00337 649 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 RFXANKO14593 260 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 SDC1P18827 310 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 EMP3P54852 163 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 CCNYL2Q5T2Q4 361 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 KLHL35Q6PF15 583 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 NECAB2Q7Z6G3 386 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 SLC39A11Q8N1S5 342 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 SCRN2Q96FV2 425 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 CCDC138Q96M89 665 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 RHNO1Q9BSD3 238 aa15.3■□□□□ 0.04
BRD9-208ENST00000489816 A0A0J9YVX5 310 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms