RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RAB33BQ9H082 229 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 CAB39LQ9H9S4 337 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 EPHA6Q9UF33 1036 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 TBK1Q9UHD2 729 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 CORO1CQ9ULV4 474 aaPredicted RBP10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 PSMD13Q9UNM6 376 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 AHCTF1Q8WYP5 2266 aa10.28□□□□□ -0.76
SCAMP4-208ENST00000489554 NBEAQ8NFP9 2946 aa10.27□□□□□ -0.76
SCAMP4-208ENST00000489554 C17orf113A0A1B0GUU1 675 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 UBA6A0AVT1 1052 aaPredicted RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 IQCF5A8MTL0 148 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CAPN5O15484 640 aaPredicted RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 RGS16O15492 202 aaPredicted RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 EFSO43281 561 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 NIPSNAP2O75323 286 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 ESR1P03372 595 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 GSTM1P09488 218 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 SLC35G4P0C7Q5 338 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 MTHFD1P11586 935 aaKnown RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 PKMP14618 531 aaKnown RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CREB1P16220 341 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CD9P21926 228 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 FMO4P31512 558 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CCNFP41002 786 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 NSG1P42857 185 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 GFERP55789 205 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 TAS2R39P59534 338 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 GSTM4Q03013 218 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 ZNF460Q14592 562 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 MROH9Q5TGP6 573 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 HECTD2Q5U5R9 776 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 TMEM207Q6UWW9 146 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 PRSS42Q7Z5A4 293 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CMC1Q7Z7K0 106 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 TRABD2AQ86V40 505 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 RSC1A1Q92681 617 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 NKD1Q969G9 470 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 PMEPA1Q969W9 287 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 TGM7Q96PF1 710 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CCM2Q9BSQ5 444 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CAPS2Q9BXY5 557 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 WWP1Q9H0M0 922 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 ZNF768Q9H5H4 540 aaKnown RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 IMP3Q9NV31 184 aaKnown RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 HEBP2Q9Y5Z4 205 aa10.27□□□□□ -0.77
SCAMP4-208ENST00000489554 QSOX1O00391 747 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 POLR1CO15160 346 aaPredicted RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 RAD1O60671 282 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 RASSF9O75901 435 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 KRT38O76015 456 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 SNRPAP09012 282 aaKnown RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 SLC35E2BP0CK96 405 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 NR1D1P20393 614 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CNTFP26441 200 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 NDUFS1P28331 727 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CLCN7P51798 805 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 GBX1Q14549 363 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 PLCL1Q15111 1095 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CACHD1Q5VU97 1274 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 FAM45BPQ6NSW5 357 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 IRGCQ6NXR0 463 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CYB5D1Q6P9G0 228 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 VASH2Q86V25 355 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 EXOC3L1Q86VI1 746 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CFAP206Q8IYR0 622 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CACNA2D3Q8IZS8 1091 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 IL22RA1Q8N6P7 574 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 GPATCH11Q8N954 259 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 GABPB2Q8TAK5 448 aaPredicted RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 FAM45AQ8TCE6 357 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CD200R1Q8TD46 325 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 TTC9Q92623 222 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 KCNJ9Q92806 393 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 ELMO2Q96JJ3 720 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 C12orf66Q96MD2 445 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 INSM2Q96T92 566 aaPredicted RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 CD180Q99467 661 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 TRIT1Q9H3H1 467 aaKnown RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 LATS2Q9NRM7 1088 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 SNX15Q9NRS6 342 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 SIDT1Q9NXL6 827 aaKnown RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 FAM8A1Q9UBU6 413 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 PILRAQ9UKJ1 303 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 SLC39A10Q9ULF5 831 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 VPS9D1Q9Y2B5 631 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 TMEM184BQ9Y519 407 aaPredicted RBP10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 COLEC10Q9Y6Z7 277 aa10.26□□□□□ -0.77
SCAMP4-208ENST00000489554 IQANK1A0A1B0GTG1 560 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 PHGDHO43175 533 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 AP2A2O94973 939 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 TSPAN12O95859 305 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 ITGB2P05107 769 aa10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 MAP4P27816 1152 aaKnown RBP10.25□□□□□ -0.77
SCAMP4-208ENST00000489554 CCR7P32248 378 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms