RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 EEFSECP57772 596 aaKnown RBP17.26■□□□□ 0.35
NPHP4-209ENST00000489180 SFT2D3Q587I9 215 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 ADNP2Q6IQ32 1131 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 PCDHGA10Q9Y5H3 936 aa17.26■□□□□ 0.35
NPHP4-209ENST00000489180 A0A1W2PRB8 838 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 DAPL1A0PJW8 107 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ANXA2P2A6NMY6 339 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 J3KR12 359 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 TSPAN4O14817 238 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 TGFB1P01137 390 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ITGB1P05556 798 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ANXA2P07355 339 aaKnown RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 GNAZP19086 355 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 NUDT6P53370 316 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 RBM48Q5RL73 367 aaKnown RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ASB18Q6ZVZ8 466 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ADGRG6Q86SQ4 1221 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 TMEM74Q96NL1 305 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 GALPQ9UBC7 116 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 FKBP7Q9Y680 259 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ATP6V1G1O75348 118 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SLC35G6P0C7Q6 338 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 KHKP50053 298 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 AP3S2P59780 193 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 DCDC1P59894 354 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SLC25A11Q02978 314 aaKnown RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SUN5Q8TC36 379 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SIPA1Q96FS4 1042 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 FAM124BQ9H5Z6 455 aaPredicted RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ANKRA2Q9H9E1 313 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 NEURL4Q96JN8 1562 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 IRAK2O43187 625 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 CREB5Q02930 508 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 GFOD2Q3B7J2 385 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 C7orf57Q8NEG2 295 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 HAVCR1Q96D42 359 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 DNAJB4Q9UDY4 337 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 MED31Q9Y3C7 131 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 XKP51811 444 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ZBED5Q49AG3 693 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 EPGNQ6UW88 154 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ANKRD23Q86SG2 305 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 CAND1Q86VP6 1230 aaKnown RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 LGI4Q8N135 537 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SMG7Q92540 1137 aaKnown RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 FCGR1BQ92637 280 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 CCDC115Q96NT0 180 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 CGREF1Q99674 301 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SLC35A5Q9BS91 424 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 TRMT61BQ9BVS5 477 aaKnown RBP17.25■□□□□ 0.35
NPHP4-209ENST00000489180 BAIAP2Q9UQB8 552 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 DIRAS1O95057 198 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 DSC3Q14574 896 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 SLC8B1Q6J4K2 584 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 GJD3Q8N144 294 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 COX18Q8N8Q8 333 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 FBXL20Q96IG2 436 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 HAPLN3Q96S86 360 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 MNTQ99583 582 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 PRRG4Q9BZD6 226 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 IL1RAPQ9NPH3 570 aa17.25■□□□□ 0.35
NPHP4-209ENST00000489180 ACOX3O15254 700 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 FGF19O95750 216 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 ALPPP05187 535 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 AP2S1P53680 142 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 MAZP56270 477 aaKnown RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 KLHL22Q53GT1 634 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 HSPBAP1Q96EW2 488 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 GIMAP2Q9UG22 337 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 TLR6Q9Y2C9 796 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CDC7O00311 574 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 SEPT4O43236 478 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 KCNA5P22460 613 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 AHCYP23526 432 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CSTF2P33240 577 aaKnown RBP eCLIP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CBX5P45973 191 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 PGDP52209 483 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CAP1Q01518 475 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 OTOP2Q7RTS6 562 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 PRSS58Q8IYP2 241 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 KCNA7Q96RP8 456 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 RPL36Q9Y3U8 105 aaKnown RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 PLIN4Q96Q06 1357 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CLIC1O00299 241 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 PTX3P26022 381 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 FBXO22Q8NEZ5 403 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 OR6K6Q8NGW6 343 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 RBM18Q96H35 190 aaKnown RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 C12orf66Q96MD2 445 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CALML5Q9NZT1 146 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 DNAJA1P31689 397 aaKnown RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 GJA8P48165 433 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 C1QTNF8P60827 252 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 TSC22D1Q15714 1073 aa17.24■□□□□ 0.35
NPHP4-209ENST00000489180 CTU1Q7Z7A3 348 aaKnown RBP17.24■□□□□ 0.35
NPHP4-209ENST00000489180 ZC3HC1Q86WB0 502 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms