RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ANKRD61A6NGH8 418 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 GLOD5A6NK44 160 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 DFFBO76075 338 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 BEST1O76090 585 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 DDHD2O94830 711 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 DANCRP0C864 163 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 SAT1P21673 171 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 JAK1P23458 1154 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 LMO4P61968 165 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 STK4Q13043 487 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 BAATQ14032 418 aaPredicted RBP3.16□□□□□ -1.9
RFC4-213ENST00000489028 HERC3Q15034 1050 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 CA9Q16790 459 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 SYT14P1Q58G82 188 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 Q6ZRP5 223 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 BTN2A1Q7KYR7 527 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 PTAR1Q7Z6K3 402 aaPredicted RBP3.16□□□□□ -1.9
RFC4-213ENST00000489028 MARVELD2Q8N4S9 558 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 DBF4BQ8NFT6 615 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 OR10S1Q8NGN2 331 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 OR52N5Q8NH56 324 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 SSMEM1Q8WWF3 244 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 AZIN2Q96A70 460 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 DHX58Q96C10 678 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 MAGED4Q96JG8 741 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 IWS1Q96ST2 819 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 RAD9AQ99638 391 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 FUCA2Q9BTY2 467 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 OR2B2Q9GZK3 357 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.16□□□□□ -1.9
RFC4-213ENST00000489028 GDE1Q9NZC3 331 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 WDR37Q9Y2I8 494 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 PPP2R2CQ9Y2T4 447 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 ANGPTL3Q9Y5C1 460 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 MEIS2O14770 477 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 ADAM20O43506 726 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 DCXO43602 365 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 TSPAN1O60635 241 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 LDHCP07864 332 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 MNDAP41218 407 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 LEPRP48357 1165 aaKnown RBP3.15□□□□□ -1.91
RFC4-213ENST00000489028 SLC9A3P48764 834 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 CLNS1AP54105 237 aaKnown RBP3.15□□□□□ -1.91
RFC4-213ENST00000489028 SPATA1Q5VX52 437 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 STXBP4Q6ZWJ1 553 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 CDK20Q8IZL9 346 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 RAB42Q8N4Z0 105 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 BMPERQ8N8U9 685 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 MCUQ8NE86 351 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 APPL2Q8NEU8 664 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 EXD1Q8NHP7 514 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 CFAP61Q8NHU2 1237 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 CCDC107Q8WV48 283 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 NXNL1Q96CM4 212 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 SPACA9Q96E40 222 aaPredicted RBP3.15□□□□□ -1.91
RFC4-213ENST00000489028 FAM20AQ96MK3 541 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 PKP2Q99959 881 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 SYT15Q9BQS2 421 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 URM1Q9BTM9 101 aaKnown RBP3.15□□□□□ -1.91
RFC4-213ENST00000489028 CLEC7AQ9BXN2 247 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 FGFBP2Q9BYJ0 223 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 WNT5BQ9H1J7 359 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 OPA3Q9H6K4 179 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 GKN1Q9NS71 199 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 ERAP1Q9NZ08 941 aa3.15□□□□□ -1.91
RFC4-213ENST00000489028 MRPL15Q9P015 296 aaKnown RBP3.15□□□□□ -1.91
RFC4-213ENST00000489028 IGLV7-46A0A075B6I9 117 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 A0A1W2PPM1 405 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 MEX3AA1L020 520 aaKnown RBP3.14□□□□□ -1.91
RFC4-213ENST00000489028 ENO4A6NNW6 628 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 ZSCAN5DPP0CG00 497 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 HAPLN1P10915 354 aaPredicted RBP3.14□□□□□ -1.91
RFC4-213ENST00000489028 OPRL1P41146 370 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 MAZP56270 477 aaKnown RBP3.14□□□□□ -1.91
RFC4-213ENST00000489028 DRP2Q13474 957 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 ENPP2Q13822 863 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 SNAPC1Q16533 368 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 ODF4Q2M2E3 257 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 UGT3A2Q3SY77 523 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 CBWD6Q4V339 395 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 CBWD3Q5JTY5 395 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 C20orf194Q5TEA3 1177 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 TMEM207Q6UWW9 146 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 ARHGAP22Q7Z5H3 698 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 DNAAF5Q86Y56 855 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 LSMEM2Q8N112 164 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 JAKMIP2Q96AA8 810 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 CENPTQ96BT3 561 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 RBM4BQ9BQ04 359 aaKnown RBP3.14□□□□□ -1.91
RFC4-213ENST00000489028 MRPL1Q9BYD6 325 aaKnown RBP3.14□□□□□ -1.91
RFC4-213ENST00000489028 THAP2Q9H0W7 228 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 CPVLQ9H3G5 476 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 MYNNQ9NPC7 610 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 PRMT7Q9NVM4 692 aaPredicted RBP3.14□□□□□ -1.91
RFC4-213ENST00000489028 NSMCE4AQ9NXX6 385 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 SPHK1Q9NYA1 384 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 GRID1Q9ULK0 1009 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 STUB1Q9UNE7 303 aa3.14□□□□□ -1.91
RFC4-213ENST00000489028 TMEM5Q9Y2B1 443 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms