RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DDX6P26196 483 aaKnown RBP eCLIP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ELAVL4P26378 380 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 YWHAQP27348 245 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NMBRP28336 390 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PKLRP30613 574 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CDX1P47902 265 aaPredicted RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SLC6A12P48065 614 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CYP2J2P51589 502 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SMSP52788 366 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PRRX1P54821 245 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NXPH1P58417 271 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DLK1P80370 383 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 GALNT3Q14435 633 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SLC36A3Q495N2 470 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 KCTD21Q4G0X4 260 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SYTL3Q4VX76 610 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ESCO2Q56NI9 601 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 RNASE12Q5GAN4 147 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 LRRC73Q5JTD7 316 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 LRRC38Q5VT99 294 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 AADACL4Q5VUY2 407 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PRSS55Q6UWB4 352 aaPredicted RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 KIRREL2Q6UWL6 708 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 RANBP10Q6VN20 620 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 B3GLCTQ6Y288 498 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF517Q6ZMY9 492 aaPredicted RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 C1QL2Q7Z5L3 287 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 TECPR1Q7Z6L1 1165 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CUZD1Q86UP6 607 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ZDHHC21Q8IVQ6 265 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 LRRC43Q8N309 656 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ANKRD13CQ8N6S4 541 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PAPD5Q8NDF8 572 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CPEB3Q8NE35 698 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MNS1Q8NEH6 495 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 OR10T2Q8NGX3 314 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MYCBPAPQ8TBZ2 947 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MIPOL1Q8TD10 442 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SELENOMQ8WWX9 145 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NT5C3BQ969T7 300 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 FKBP10Q96AY3 582 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 C16orf58Q96GQ5 468 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CDKN2AIPNLQ96HQ2 116 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 QRFPRQ96P65 431 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 USP28Q96RU2 1077 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 RASL10BQ96S79 203 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MYADMQ96S97 322 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DDOQ99489 341 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SEPHS2Q99611 448 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CCT7Q99832 543 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 RHOXF2Q9BQY4 288 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 FAM213AQ9BRX8 229 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PCGF1Q9BSM1 259 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DUSP26Q9BV47 211 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ALG8Q9BVK2 526 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 GPR61Q9BZJ8 451 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NAPBQ9H115 298 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CDT1Q9H211 546 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 HIPK3Q9H422 1215 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 EHD1Q9H4M9 534 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CHMP1AQ9HD42 196 aaPredicted RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MYNNQ9NPC7 610 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PIGVQ9NUD9 493 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NDRG3Q9UGV2 375 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ATP6V1HQ9UI12 483 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 TEKT2Q9UIF3 430 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ITM2BQ9Y287 266 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DLGAP4Q9Y2H0 992 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 HBS1LQ9Y450 684 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NME7Q9Y5B8 376 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 PTCH1Q13635 1447 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 TRGV11A0A075B6L2 103 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 A0A1B0GUL7 405 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 PIPSLA2A3N6 862 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 ANKUB1A6NFN9 424 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 NCF1BA6NI72 391 aaPredicted RBP3.27□□□□□ -1.89
PRPF4-203ENST00000488937 NCF1CA8MVU1 366 aaPredicted RBP3.27□□□□□ -1.89
PRPF4-203ENST00000488937 VWC2LB2RUY7 222 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 LGALS8O00214 317 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 DNALI1O14645 258 aaPredicted RBP3.27□□□□□ -1.89
PRPF4-203ENST00000488937 ANKRD28O15084 1053 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 CTAGE5O15320 804 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 MAGEB2O15479 319 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 FLRT2O43155 660 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 NDUFS4O43181 175 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 HSF2BPO75031 334 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 RAD51DO75771 328 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 CDKL5O76039 1030 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 NXPH3O95157 252 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 SPDEFO95238 335 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 CD63P08962 238 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 ANKRD34CP0C6C1 535 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 EGR2P11161 476 aaPredicted RBP3.27□□□□□ -1.89
PRPF4-203ENST00000488937 EPB41P11171 864 aaKnown RBP3.27□□□□□ -1.89
PRPF4-203ENST00000488937 CALB2P22676 271 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 CYP2F1P24903 491 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 ALDH4A1P30038 563 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 SOX2P48431 317 aa3.27□□□□□ -1.89
PRPF4-203ENST00000488937 LHX1P48742 406 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms