RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SHARPINQ9H0F6 387 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 ASB8Q9H765 288 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 DNAJC18Q9H819 358 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 PDFQ9HBH1 243 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 SERINC1Q9NRX5 453 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 SPHK1Q9NYA1 384 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 THAP10Q9P2Z0 257 aaPredicted RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 ABCD2Q9UBJ2 740 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 AMACRQ9UHK6 382 aa1.92□□□□□ -2.1
CCDC93-209ENST00000488908 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.92□□□□□ -2.1
CCDC93-209ENST00000488908 IGLV4-3A0A075B6K6 122 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 HYKKA2RU49 373 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 SCAMP1O15126 338 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 HOXC11O43248 304 aaPredicted RBP1.91□□□□□ -2.1
CCDC93-209ENST00000488908 SNAP91O60641 907 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 POLBP06746 335 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 SPARCP09486 303 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 XGP55808 180 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 ZSCAN23Q3MJ62 389 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 HERC4Q5GLZ8 1057 aaPredicted RBP1.91□□□□□ -2.1
CCDC93-209ENST00000488908 C10orf62Q5T681 223 aaPredicted RBP1.91□□□□□ -2.1
CCDC93-209ENST00000488908 ZER1Q7Z7L7 766 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 OR4N5Q8IXE1 308 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 CFAP206Q8IYR0 622 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 PRR22Q8IZ63 422 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 CCDC185Q8N715 623 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 METTL6Q8TCB7 284 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 MRAPQ8TCY5 172 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 APOBEC4Q8WW27 367 aaKnown RBP1.91□□□□□ -2.1
CCDC93-209ENST00000488908 ST8SIA4Q92187 359 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 HTRA1Q92743 480 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 ZNF285Q96NJ3 590 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 WDFY2Q96P53 400 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 SPAG5Q96R06 1193 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 GAD1Q99259 594 aa1.91□□□□□ -2.1
CCDC93-209ENST00000488908 IGKV6-21A0A0C4DH24 114 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 H0YAE9 185 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 OGTO15294 1046 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 TRUB2O95900 331 aaKnown RBP1.9□□□□□ -2.11
CCDC93-209ENST00000488908 IGKV3-11P04433 115 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 HSD3B1P14060 373 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 CDH3P22223 829 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 LBX1P52954 281 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 IRX4P78413 519 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 RUNX3Q13761 415 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 ZNF74Q16587 644 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 ATAD3CQ5T2N8 411 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 COMMD2Q86X83 199 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 ARID3BQ8IVW6 561 aaPredicted RBP1.9□□□□□ -2.11
CCDC93-209ENST00000488908 FRMD1Q8N878 549 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 RTL3Q8N8U3 475 aaKnown RBP1.9□□□□□ -2.11
CCDC93-209ENST00000488908 C9orf43Q8TAL5 461 aaPredicted RBP1.9□□□□□ -2.11
CCDC93-209ENST00000488908 AGAP11Q8TF27 550 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 BADQ92934 168 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 CEP295NLQ96MC4 621 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 SLC39A8Q9C0K1 460 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 WNT5BQ9H1J7 359 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 SETD4Q9NVD3 440 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 RHCGQ9UBD6 479 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 PCDHGA5Q9Y5G8 931 aa1.9□□□□□ -2.11
CCDC93-209ENST00000488908 HDAC3O15379 428 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 SSX4O60224 188 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 SH3BGRLO75368 114 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 TNFAIP3P21580 790 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 BSGP35613 385 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 EIF4A2Q14240 407 aaKnown RBP1.89□□□□□ -2.11
CCDC93-209ENST00000488908 MELKQ14680 651 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 HERC3Q15034 1050 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 PHLDA2Q53GA4 152 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 RNF130Q86XS8 419 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 CCDC107Q8WV48 283 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 ERLEC1Q96DZ1 483 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 PHYHIPLQ96FC7 376 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 ELMOD3Q96FG2 381 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 BTBD10Q9BSF8 475 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 UBAC1Q9BSL1 405 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 MIS12Q9H081 205 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 MTHFD2LQ9H903 347 aaPredicted RBP1.89□□□□□ -2.11
CCDC93-209ENST00000488908 JPT2Q9H910 190 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 WSB2Q9NYS7 404 aaPredicted RBP1.89□□□□□ -2.11
CCDC93-209ENST00000488908 ZNF581Q9P0T4 197 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 C19orf25Q9UFG5 118 aaPredicted RBP1.89□□□□□ -2.11
CCDC93-209ENST00000488908 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.89□□□□□ -2.11
CCDC93-209ENST00000488908 NENFQ9UMX5 172 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 ARHGAP26Q9UNA1 814 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 PA2G4Q9UQ80 394 aaKnown RBP1.89□□□□□ -2.11
CCDC93-209ENST00000488908 MTMR6Q9Y217 621 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 NAALAD2Q9Y3Q0 740 aa1.89□□□□□ -2.11
CCDC93-209ENST00000488908 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-209ENST00000488908 FAM237BA0A1B0GVD1 139 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 FAM168BA1KXE4 195 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 DDHD2O94830 711 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 PRKAR1AP10644 381 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 SOX3P41225 446 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 KHKP50053 298 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 PPIAP62937 165 aaKnown RBP1.88□□□□□ -2.11
CCDC93-209ENST00000488908 GCNT1Q02742 428 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 ZNF177Q13360 481 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-209ENST00000488908 CDH18Q13634 790 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 TAB1Q15750 504 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms