RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 CCDC189A1A4V9 331 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 FAM221BA6H8Z2 402 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 OR6C74A6NCV1 312 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 NPEPPSL1A6NEC2 478 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 LILRA5A6NI73 299 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ARHGEF33A8MVX0 844 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 GOLGA8RI6L899 631 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 CDC7O00311 574 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 B4GAT1O43505 415 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 DUX1O43812 170 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 RFPL1O75677 317 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 WISP3O95389 354 aaPredicted RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 S100BP04271 92 aaPredicted RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 RPLP0P05388 317 aaKnown RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 PROS1P07225 676 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 RBP1P09455 135 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 CD1DP15813 335 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 TYRP1P17643 537 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 TFEBP19484 476 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 MAGEA12P43365 314 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 CCT5P48643 541 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 RAB28P51157 221 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 CCL7P80098 99 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 RELBQ01201 579 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 NR1D2Q14995 579 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ACAP2Q15057 778 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 TSNQ15631 228 aaKnown RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 TSNAXIP1Q2TAA8 658 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 FBXO38Q6PIJ6 1188 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 USP53Q70EK8 1073 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 SPRED1Q7Z699 444 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ADAMTSL2Q86TH1 951 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 LCA5Q86VQ0 697 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 OOSP2Q86WS3 158 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 GPSM1Q86YR5 675 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 PLXDC1Q8IUK5 500 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 GOLGA6L1Q8N7Z2 621 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 FBXO15Q8NCQ5 510 aaPredicted RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 KCTD4Q8WVF5 259 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ATL1Q8WXF7 558 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 JPH3Q8WXH2 748 aaPredicted RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 NCSTNQ92542 709 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 KIAA1191Q96A73 305 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ZDHHC12Q96GR4 267 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 CCDC138Q96M89 665 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 PKP4Q99569 1192 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 DPYSL5Q9BPU6 564 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 UNKQ9C0B0 810 aaKnown RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 PCMTD2Q9NV79 361 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 HRASLS2Q9NWW9 162 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ARL15Q9NXU5 204 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 OR6C2Q9NZP2 312 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 DCDC2Q9UHG0 476 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 LGALS13Q9UHV8 139 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 ADAMTS6Q9UKP5 1117 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 RNF112Q9ULX5 631 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 PLAGL1Q9UM63 463 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 NOVA2Q9UNW9 492 aaKnown RBP9.99□□□□□ -0.81
SKA1-204ENST00000488454 PDE10AQ9Y233 779 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 LRP4O75096 1905 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 IGHV1OR21-1A0A087WYE8 117 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 SYCE1LA8MT33 242 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 MYO1CO00159 1063 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 OPA1O60313 960 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 KCNK5O95279 499 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 GUCA1CO95843 209 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 GSTA1P08263 222 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 ANXA5P08758 320 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 KRT4P19013 534 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 CD1CP29017 333 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 AP1S2P56377 157 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 IRF9Q00978 393 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 PUM1Q14671 1186 aaKnown RBP eCLIP9.98□□□□□ -0.81
SKA1-204ENST00000488454 ARHGAP19Q14CB8 494 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 CLPPQ16740 277 aaPredicted RBP9.98□□□□□ -0.81
SKA1-204ENST00000488454 NKAIN2Q5VXU1 208 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 ANKS6Q68DC2 871 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 ISCA2Q86U28 154 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 SYTL1Q8IYJ3 562 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 SLC22A18Q96BI1 424 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 PKNOX2Q96KN3 472 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 GFM1Q96RP9 751 aaKnown RBP9.98□□□□□ -0.81
SKA1-204ENST00000488454 SMC6Q96SB8 1091 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 EGFL8Q99944 293 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 IQCGQ9H095 443 aaKnown RBP9.98□□□□□ -0.81
SKA1-204ENST00000488454 ACBD3Q9H3P7 528 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 XKR8Q9H6D3 395 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 ALG9Q9H6U8 611 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 IGSF5Q9NSI5 407 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 UTP6Q9NYH9 597 aaKnown RBP9.98□□□□□ -0.81
SKA1-204ENST00000488454 SPATA7Q9P0W8 599 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 OARD1Q9Y530 152 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 ENTPD2Q9Y5L3 495 aa9.98□□□□□ -0.81
SKA1-204ENST00000488454 PIPSLA2A3N6 862 aa9.97□□□□□ -0.81
SKA1-204ENST00000488454 GSAPA4D1B5 854 aa9.97□□□□□ -0.81
SKA1-204ENST00000488454 OR5K3A6NET4 321 aa9.97□□□□□ -0.81
SKA1-204ENST00000488454 C2orf74A8MZ97 194 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms