RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TRIM8Q9BZR9 551 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 HMG20AQ9NP66 347 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 MARCH5Q9NX47 278 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 SLCO3A1Q9UIG8 710 aa11.54□□□□□ -0.56
TRA2B-214ENST00000487615 CLIC1O00299 241 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 GSRP00390 522 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 FPGSQ05932 587 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 GCNT6Q5T4J0 391 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 PSRC1Q6PGN9 363 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 AGTRAPQ6RW13 159 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 RGL4Q8IZJ4 473 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 PHC3Q8NDX5 983 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 OTUB2Q96DC9 234 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 ATOH8Q96SQ7 321 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 BOCQ9BWV1 1114 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 NOL6Q9H6R4 1146 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 TLR9Q9NR96 1032 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 KIAA0100Q14667 2235 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 CACNB4O00305 520 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 HTRA2O43464 458 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 PCDH7O60245 1069 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 EEDO75530 441 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 ANGPTL1O95841 491 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 CD70P32970 193 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 ARL4DP49703 201 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 NCF4Q15080 339 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 GRASPQ7Z6J2 395 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 THOC6Q86W42 341 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 CELF5Q8N6W0 485 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 OR5K1Q8NHB7 308 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 TMBIM1Q969X1 311 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 SPATA5L1Q9BVQ7 753 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 SPHK2Q9NRA0 654 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 RAPGEFL1Q9UHV5 662 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 ISM1B1AKI9 464 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 hCG_2039718K7EN88 272 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 MAN1A2O60476 641 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 SERPINB7O75635 380 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 AP2A2O94973 939 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 DNTTP04053 509 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 PCCBP05166 539 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 RPS17P08708 135 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 CAPN3P20807 821 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF10P21506 573 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 PGFP49763 221 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 FOXA1P55317 472 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 USP39Q53GS9 565 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 LARP4Q71RC2 724 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■□□□□ 11.1
TRA2B-214ENST00000487615 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 MARVELD2Q8N4S9 558 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 MYDGFQ969H8 173 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 TRMT2BQ96GJ1 504 aaKnown RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 PLGRKTQ9HBL7 147 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF282Q9UDV7 671 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-214ENST00000487615 SH3GLB1Q9Y371 365 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 TRIP11Q15643 1979 aa11.53□□□□□ -0.56
TRA2B-214ENST00000487615 TGM5O43548 720 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 BMP10O95393 424 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 MAPK12P53778 367 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 SMIM11AP58511 58 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ABHD18Q0P651 414 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 TCEA2Q15560 299 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 PGM2L1Q6PCE3 622 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 POF1BQ8WVV4 589 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 CXorf40BQ96DE9 158 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 SCRN2Q96FV2 425 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 CMTM7Q96FZ5 175 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ZNF607Q96SK3 696 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 YIPF2Q9BWQ6 316 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 TIMMDC1Q9NPL8 285 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ERVW-1Q9UQF0 538 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 A0A0U1RQS6 177 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 NOBOXO60393 691 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 LEFTY1O75610 366 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 HSD17B1P14061 328 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ARNTP27540 789 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ERVPABLB-1P60509 514 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ATP1A4Q13733 1029 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ABRAXAS2Q15018 415 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 TLR1Q15399 786 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 ATP13A5Q4VNC0 1218 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 AMZ2Q86W34 360 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 C1orf52Q8N6N3 182 aaKnown RBP11.52□□□□□ -0.56
TRA2B-214ENST00000487615 GORASP1Q9BQQ3 440 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 IL26Q9NPH9 171 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 PDE10AQ9Y233 779 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 MAP4K5Q9Y4K4 846 aa11.52□□□□□ -0.56
TRA2B-214ENST00000487615 RBBP6Q7Z6E9 1792 aaKnown RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3DA0A087WVF3 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3IA0A087WXS9 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3EA0A087X179 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3KA0A087X1G2 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3FA6NER0 549 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 TBC1D3LB9A6J9 549 aa11.52□□□□□ -0.57
TRA2B-214ENST00000487615 I6L893 689 aaPredicted RBP11.52□□□□□ -0.57
TRA2B-214ENST00000487615 RHOP08100 348 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms