RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ITIH6Q6UXX5 1313 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 F5H423 210 aaPredicted RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 F8W8V4 182 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 K7ENM7 598 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 E2F3O00716 465 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 CTDNEP1O95476 244 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 TUBB4AP04350 444 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 FDPSP14324 419 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 NFKBIAP25963 317 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 RBL1P28749 1068 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 CSTF2P33240 577 aaKnown RBP eCLIP4.32□□□□□ -1.72
CNN3-206ENST00000487539 NUDT1P36639 197 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 IST1P53990 364 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 SLC12A3P55017 1021 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ST8SIA6P61647 398 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 RPS24P62847 133 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 TLE4Q04727 773 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 GOLGA8FQ08AF8 430 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 GOLGA8DPQ0D2H9 430 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ART3Q13508 389 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 E2F5Q15329 346 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ZRSR1Q15695 479 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 ZNF630Q2M218 657 aaPredicted RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 COBLL1Q53SF7 1204 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 FAXCQ5TGI0 409 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 KYAT3Q6YP21 454 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 BEND5Q7L4P6 421 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 KDELC2Q7Z4H8 507 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ACOT1Q86TX2 421 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 BRSK2Q8IWQ3 736 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 BMPERQ8N8U9 685 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 C12orf29Q8N999 325 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ATP11CQ8NB49 1132 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ERMNQ8TAM6 284 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 TSACCQ96A04 125 aaPredicted RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 KIAA1143Q96AT1 154 aaPredicted RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 TMEM159Q96B96 161 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 CTHRC1Q96CG8 243 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 JAKMIP1Q96N16 626 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 BARD1Q99728 777 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 TMEM121Q9BTD3 319 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 NUDT9Q9BW91 350 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 AGXT2Q9BYV1 514 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 INTS2Q9H0H0 1204 aaKnown RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 SMYD3Q9H7B4 428 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 DMAP1Q9NPF5 467 aaPredicted RBP4.32□□□□□ -1.72
CNN3-206ENST00000487539 NRIP3Q9NQ35 241 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 TBC1D23Q9NUY8 699 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 COMMD8Q9NX08 183 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 MGAT4CQ9UBM8 478 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 HMGXB4Q9UGU5 601 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ITGA11Q9UKX5 1188 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 HPSEQ9Y251 543 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 ZNF510Q9Y2H8 683 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 RPS6KL1Q9Y6S9 549 aa4.32□□□□□ -1.72
CNN3-206ENST00000487539 A6NCN8 305 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 ARGFXA6NJG6 315 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 A6NL46 340 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 CLCA1A8K7I4 914 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 PPP6CO00743 305 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 AREL1O15033 823 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 SLC7A4O43246 635 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 MSI1O43347 362 aaKnown RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 SPRY2O43597 315 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 TACC1O75410 805 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 STK17BO94768 372 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 NHLRC4P0CG21 123 aaPredicted RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 CAPN3P20807 821 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 MUTP22033 750 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 RPS6KB1P23443 525 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 CD1CP29017 333 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 ADORA2BP29275 332 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 EPHB2P29323 1055 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 SSTR2P30874 369 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 KRT2P35908 639 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 DLSTP36957 453 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 PIK3CBP42338 1070 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 DIO1P49895 249 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 ZNF81P51508 661 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 NDST1P52848 882 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 COPB1P53618 953 aaKnown RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 MAZP56270 477 aaKnown RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 EVCP57679 992 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 PFN3P60673 137 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 RPS18P62269 152 aaKnown RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 COG7P83436 770 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 GTF2BQ00403 316 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 PSG6Q00889 435 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 MC1RQ01726 317 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 Q0VFX4 171 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 RAPSNQ13702 412 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 KCNAB1Q14722 419 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 FAM133BQ5BKY9 247 aaKnown RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 MANEALQ5VSG8 457 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 NADSYN1Q6IA69 706 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 CLEC20AQ6ZU45 233 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 BCDIN3DQ7Z5W3 292 aaKnown RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 APLFQ8IW19 511 aaPredicted RBP4.31□□□□□ -1.72
CNN3-206ENST00000487539 CARNMT1Q8N4J0 409 aa4.31□□□□□ -1.72
CNN3-206ENST00000487539 MYCT1Q8N699 235 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms