RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GPR135Q8IZ08 494 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 DSELQ8IZU8 1212 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 DNAJC22Q8N4W6 341 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 OR2L8Q8NGY9 312 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 N4BP2L2Q92802 583 aaPredicted RBP11.04□□□□□ -0.64
SPEN-205ENST00000487496 SLCO2A1Q92959 643 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 SLC22A18Q96BI1 424 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 INTS10Q9NVR2 710 aaKnown RBP11.04□□□□□ -0.64
SPEN-205ENST00000487496 PCYOX1Q9UHG3 505 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 POLHQ9Y253 713 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 VPS9D1Q9Y2B5 631 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 KCNMB2Q9Y691 235 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 MAD1L1Q9Y6D9 718 aa11.04□□□□□ -0.64
SPEN-205ENST00000487496 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 PRICKLE3O43900 615 aaPredicted RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 OR2B3O76000 313 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 USP1O94782 785 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 MATN4O95460 622 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 CTSBP07858 339 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 F7P08709 466 aaPredicted RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 MAGP20916 626 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 ATP5DP30049 168 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 BDKRB1P46663 353 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 NFKB2Q00653 900 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 PTK6Q13882 451 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SF1Q15637 639 aaKnown RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 PTCHD3Q3KNS1 767 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 CNSTQ6PJW8 725 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SYVN1Q86TM6 617 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 TAX1BP1Q86VP1 789 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 LMNTD2Q8IXW0 634 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SYTL1Q8IYJ3 562 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 ZBTB2Q8N680 514 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SEC14L1Q92503 715 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 CAPZA3Q96KX2 299 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 FOPNLQ96NB1 174 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 NLNQ9BYT8 704 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SLC7A5P2Q9GIP4 190 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SPRTNQ9H040 489 aaPredicted RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 FBXO6Q9NRD1 293 aaPredicted RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 C20orf96Q9NUD7 363 aaPredicted RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 ASIC3Q9UHC3 531 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 TSR3Q9UJK0 312 aaKnown RBP11.03□□□□□ -0.64
SPEN-205ENST00000487496 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 PLCL2Q9UPR0 1127 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 KLHL20Q9Y2M5 609 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 MRFAP1Q9Y605 127 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 AP1M2Q9Y6Q5 423 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 FAM169AQ9Y6X4 670 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 SPTA1P02549 2419 aa11.03□□□□□ -0.64
SPEN-205ENST00000487496 TLN1Q9Y490 2541 aaKnown RBP11.02□□□□□ -0.64
SPEN-205ENST00000487496 KRT87PA6NCN2 255 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 E5RI56 91 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 J3QKU1 62 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 SLC28A2O43868 658 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 CAPN1P07384 714 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 HBQ1P09105 142 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 RAB40ALP0C0E4 278 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 IVDP26440 423 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 CCNFP41002 786 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 SLC1A2P43004 574 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 CLCN7P51798 805 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 DHX9Q08211 1270 aaKnown RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 IL10RAQ13651 578 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 UGT8Q16880 541 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 KLHL38Q2WGJ6 581 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 HSP90AA5PQ58FG0 334 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 ACSBG2Q5FVE4 666 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 ZNF385CQ66K41 422 aaPredicted RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 FAM198BQ6UWH4 519 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 PCGF5Q86SE9 256 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 RAB42Q8N4Z0 105 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 ENDOVQ8N8Q3 282 aaKnown RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
SPEN-205ENST00000487496 C9orf43Q8TAL5 461 aaPredicted RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 HMGCLL1Q8TB92 370 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 MAGEC3Q8TD91 643 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 DENND1AQ8TEH3 1009 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 THAP4Q8WY91 577 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 ABHD17AQ96GS6 310 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 SLC30A3Q99726 388 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 DPH2Q9BQC3 489 aaPredicted RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 ZNF71Q9NQZ8 489 aaPredicted RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 EURLQ9NYK6 297 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 TCFL5Q9UL49 500 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 SNX7Q9UNH6 387 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 MED16Q9Y2X0 877 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 HEMK1Q9Y5R4 338 aaPredicted RBP11.02□□□□□ -0.65
SPEN-205ENST00000487496 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.65
SPEN-205ENST00000487496 SEC16AO15027 2179 aa11.01□□□□□ -0.65
SPEN-205ENST00000487496 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
SPEN-205ENST00000487496 ZSCAN9O15535 394 aaPredicted RBP11.01□□□□□ -0.65
SPEN-205ENST00000487496 SUV39H1O43463 412 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms