RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 BBC3Q96PG8 261 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 MRPL57Q9BQC6 102 aaKnown RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 DUSP23Q9BVJ7 150 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 MRPL46Q9H2W6 279 aaKnown RBP12.41□□□□□ -0.42
HDAC6-229ENST00000486665 RAXQ9Y2V3 346 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 RNF215Q9Y6U7 377 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 U3KQA8 63 aa12.41□□□□□ -0.42
HDAC6-229ENST00000486665 NCF1BA6NI72 391 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 NCF1CA8MVU1 366 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 G3V2L1 256 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 MYO1CO00159 1063 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 DKK1O94907 266 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 GUCA1CO95843 209 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 RPN2P04844 631 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 NCF1P14598 390 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 NDUFS1P28331 727 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ETV4P43268 484 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 MAPK9P45984 424 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 GPR18Q14330 331 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 TGFBIQ15582 683 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ZXDCQ2QGD7 858 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 C18orf21Q32NC0 220 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ZCCHC8Q6NZY4 707 aaKnown RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ZNF761Q86XN6 746 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 DCUN1D3Q8IWE4 304 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 OR52E1Q8NGJ3 308 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 RAD51AP1Q96B01 352 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 CRELD1Q96HD1 420 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 PKNOX2Q96KN3 472 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 IL17FQ96PD4 163 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 FAM111AQ96PZ2 611 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 MENTQ9BUN1 341 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 XKR8Q9H6D3 395 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 CCDC86Q9H6F5 360 aaKnown RBP12.4□□□□□ -0.42
HDAC6-229ENST00000486665 KIR3DX1Q9H7L2 352 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 RDH14Q9HBH5 336 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 POT1Q9NUX5 634 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 POLG2Q9UHN1 485 aa12.4□□□□□ -0.42
HDAC6-229ENST00000486665 ZFC3H1O60293 1989 aaKnown RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TMEM120BA0PK00 339 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 CCDC189A1A4V9 331 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 FAM149AA5PLN7 773 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 SUPT3HB4E1H0 165 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TAPBPO15533 448 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 DLX3O60479 287 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 SUPT3HO75486 399 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 HIST1H2AGP0C0S8 130 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 HIST1H2ADP20671 130 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 FASLGP48023 281 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 KPNA2P52292 529 aaKnown RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 HHEXQ03014 270 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 FASTKQ14296 549 aaKnown RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 NR0B2Q15466 257 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 CCDC153Q494R4 210 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 FBXO48Q5FWF7 155 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TTC23LQ6PF05 361 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TMEM26Q6ZUK4 368 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 FRA10AC1Q70Z53 315 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TMPRSS7Q7RTY8 843 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 C2orf73Q8N5S3 287 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 ANKRD42Q8N9B4 389 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 OR4E2Q8NGC2 313 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 MAGEC3Q8TD91 643 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 RHBDD1Q8TEB9 315 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 ZFPM2Q8WW38 1151 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 RHBDF1Q96CC6 855 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 HIST1H2AHQ96KK5 128 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 CCDC138Q96M89 665 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 HIST1H2AJQ99878 128 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 SELENOSQ9BQE4 189 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 H2AFJQ9BTM1 129 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TBC1D10AQ9BXI6 508 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 TRIM54Q9BYV2 358 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 IQCGQ9H095 443 aaKnown RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 MLXIPLQ9NP71 852 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 NUDT4Q9NZJ9 180 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 CD274Q9NZQ7 290 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 STOX2Q9P2F5 926 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 LRIT1Q9P2V4 623 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 PADI4Q9UM07 663 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 ICKQ9UPZ9 632 aa12.39□□□□□ -0.43
HDAC6-229ENST00000486665 APOBEC2Q9Y235 224 aaKnown RBP12.39□□□□□ -0.43
HDAC6-229ENST00000486665 ARHGEF17Q96PE2 2063 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-229ENST00000486665 URB1O60287 2271 aaKnown RBP12.38□□□□□ -0.43
HDAC6-229ENST00000486665 LRRC14BA6NHZ5 514 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 SYCE1LA8MT33 242 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CASC3O15234 703 aaKnown RBP12.38□□□□□ -0.43
HDAC6-229ENST00000486665 KLK8O60259 260 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 SLC16A8O95907 504 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 CPA3P15088 417 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 IMPA1P29218 277 aa12.38□□□□□ -0.43
HDAC6-229ENST00000486665 GRK6P43250 576 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms