RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GDPD4Q6W3E5 623 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 PTCHD4Q6ZW05 846 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 UBE2R2Q712K3 238 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SLC26A9Q7LBE3 791 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 PIWIL3Q7Z3Z3 882 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 TAF8Q7Z7C8 310 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZDHHC17Q8IUH5 632 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ARHGEF19Q8IW93 802 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SCUBE1Q8IWY4 988 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF683Q8IZ20 524 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 RNF10Q8N5U6 811 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 C19orf47Q8N9M1 422 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF397Q8NF99 534 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 OR2AP1Q8NGE2 309 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SLC26A7Q8TE54 656 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 APOBEC4Q8WW27 367 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 KIAA1143Q96AT1 154 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SLC45A3Q96JT2 553 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 KREMEN1Q96MU8 473 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 WDR92Q96MX6 357 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 CPXM1Q96SM3 734 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 RBM15Q96T37 977 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 NPY6RQ99463 290 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SIKE1Q9BRV8 207 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 APOOQ9BUR5 198 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 CNPPD1Q9BV87 410 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZYG11BQ9C0D3 744 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SCAND2PQ9GZW5 306 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 MAGEH1Q9H213 219 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 DPEP2Q9H4A9 486 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 STN1Q9H668 368 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 UBE2TQ9NPD8 197 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 RPRD1BQ9NQG5 326 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF71Q9NQZ8 489 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SNTG1Q9NSN8 517 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 PIGVQ9NUD9 493 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 COQ3Q9NZJ6 369 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 PLEKHB1Q9UF11 243 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 FETUBQ9UGM5 382 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 BAG5Q9UL15 447 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 PCDHGB4Q9UN71 923 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 LRP4O75096 1905 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 RHPN2P1A8MT19 583 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 PTP4A3O75365 173 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 TSPAN9O75954 239 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 AGFG2O95081 481 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 ECDO95905 644 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 NR2F1P10589 423 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 CCL4P13236 92 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 LIFP15018 202 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MSNP26038 577 aaKnown RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 PEX2P28328 305 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 GKP32189 559 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 UGT1A3P35503 534 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 ETV3P41162 512 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 PPP1R2P41236 205 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 YBEYP58557 167 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 GMFBP60983 142 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 B4GALNT1Q00973 533 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MC1RQ01726 317 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 C17orf67Q0P5P2 114 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MTM1Q13496 603 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 BMPR2Q13873 1038 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 SQLEQ14534 574 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MORF4L2Q15014 288 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MAPRE2Q15555 327 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 TRADDQ15628 312 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 AMZ1Q400G9 498 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 TMEM52BQ4KMG9 183 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 LACTB2Q53H82 288 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 RNF220Q5VTB9 566 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 FAM183BPQ6ZVS7 135 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 RHOUQ7L0Q8 258 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 OVCH2Q7RTZ1 564 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 R3HCC1LQ7Z5L2 792 aaKnown RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 CDH24Q86UP0 819 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 CAND1Q86VP6 1230 aaKnown RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 IRF2BP1Q8IU81 584 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 DENND6AQ8IWF6 608 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 WDTC1Q8N5D0 677 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 DPP10Q8N608 796 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 LRRN4CLQ8ND94 238 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 OR6K2Q8NGY2 324 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MIB2Q96AX9 1013 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 EFHD2Q96C19 240 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 PGAP3Q96FM1 320 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 CMTM3Q96MX0 182 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 GDAP1L1Q96MZ0 367 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MIPEPQ99797 713 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 DPYSL5Q9BPU6 564 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 BCL7BQ9BQE9 202 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 WRAP53Q9BUR4 548 aaKnown RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 DDA1Q9BW61 102 aa6.68□□□□□ -1.34
HDAC3-209ENST00000486618 SORBS1Q9BX66 1292 aaKnown RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 MMADHCQ9H3L0 296 aaPredicted RBP6.68□□□□□ -1.34
HDAC3-209ENST00000486618 GPN2Q9H9Y4 310 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms