RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MED21Q13503 144 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 RUNX3Q13761 415 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 RAET1GQ6H3X3 334 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 DLEU7Q6UYE1 221 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 KLHDC8AQ8IYD2 350 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 FAM9CQ8IZT9 166 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 SLC13A3Q8WWT9 602 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 MTFMTQ96DP5 389 aaKnown RBP19.82■□□□□ 0.76
HPS3-206ENST00000486530 PLA2G2FQ9BZM2 168 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 S1PR5Q9H228 398 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 SLAMF8Q9P0V8 285 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 CLEC1BQ9P126 229 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 EGFL7Q9UHF1 273 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 SCOCQ9UIL1 159 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 CNOT11Q9UKZ1 510 aaKnown RBP19.82■□□□□ 0.76
HPS3-206ENST00000486530 SNX13Q9Y5W8 968 aa19.82■□□□□ 0.76
HPS3-206ENST00000486530 EIF4E1BA6NMX2 242 aaKnown RBP19.81■□□□□ 0.76
HPS3-206ENST00000486530 ARPC2O15144 300 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 LZTS3O60299 673 aaPredicted RBP19.81■□□□□ 0.76
HPS3-206ENST00000486530 SMNDC1O75940 238 aaKnown RBP eCLIP19.81■□□□□ 0.76
HPS3-206ENST00000486530 IL6P05231 212 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 JUPP14923 745 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 HALP42357 657 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 GPR1P46091 355 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 DGKQP52824 942 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 ZNF33BQ06732 778 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 PWP1Q13610 501 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 USP39Q53GS9 565 aaKnown RBP19.81■□□□□ 0.76
HPS3-206ENST00000486530 LIPJQ5W064 366 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 TMEM154Q6P9G4 183 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 MYADMQ96S97 322 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 TRIM8Q9BZR9 551 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 THAP10Q9P2Z0 257 aaPredicted RBP19.81■□□□□ 0.76
HPS3-206ENST00000486530 TMED5Q9Y3A6 229 aa19.81■□□□□ 0.76
HPS3-206ENST00000486530 KRT87PA6NCN2 255 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 MMP20O60882 483 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 MAPK1P28482 360 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 PBLDP30039 288 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 GJA4P35212 333 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 IL12RB1P42701 662 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 HSPA13P48723 471 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 CCR3P51677 355 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 CHIT1Q13231 466 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 AASDHQ4L235 1098 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 ZNF658BQ4V348 819 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 ATAT1Q5SQI0 421 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 FRG2Q64ET8 278 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 NAIF1Q69YI7 327 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 MMAAQ8IVH4 418 aaKnown RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 YAF2Q8IY57 180 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 LILRA3Q8N6C8 439 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 RAB7BQ96AH8 199 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 CMTM7Q96FZ5 175 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 FRG2BQ96QU4 278 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 CGREF1Q99674 301 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 HDAC8Q9BY41 377 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 CLMPQ9H6B4 373 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 CCM2LQ9NUG4 571 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 STOX2Q9P2F5 926 aaPredicted RBP19.8■□□□□ 0.76
HPS3-206ENST00000486530 MYO9BQ13459 2157 aa19.8■□□□□ 0.76
HPS3-206ENST00000486530 DHRS12A0PJE2 317 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 PLK4O00444 970 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 KCNH1O95259 989 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 PRPS2P11908 318 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 BCKDHAP12694 445 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 ACPPP15309 386 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 PSMA4P25789 261 aaKnown RBP19.79■□□□□ 0.76
HPS3-206ENST00000486530 HTR1EP28566 365 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 EIF2DP41214 584 aaKnown RBP19.79■□□□□ 0.76
HPS3-206ENST00000486530 BDKRB1P46663 353 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 GTF2H3Q13889 308 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 FXNQ16595 210 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 AGTRAPQ6RW13 159 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 SUSD1Q6UWL2 747 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 THOC6Q86W42 341 aaKnown RBP19.79■□□□□ 0.76
HPS3-206ENST00000486530 SPPL2CQ8IUH8 684 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 CXorf40AQ8TE69 158 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 CANT1Q8WVQ1 401 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 LRTOMTQ8WZ04 291 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 ZNF514Q96K75 400 aaPredicted RBP19.79■□□□□ 0.76
HPS3-206ENST00000486530 TMEM74Q96NL1 305 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 Q9H521 79 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 RAB26Q9ULW5 256 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 H3BM21 787 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 K7ESM1 405 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 PRAMEF4O60810 478 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 LILRB5O75023 590 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 EPHX1P07099 455 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 RPS14P62263 151 aaKnown RBP19.79■□□□□ 0.76
HPS3-206ENST00000486530 IRF8Q02556 426 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 FOLH1Q04609 750 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 FAM174BQ3ZCQ3 159 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 SLC44A4Q53GD3 710 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 PRAMEF9Q5VWM5 478 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 CHRDL2Q6WN34 429 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 IFNEQ86WN2 208 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 TRAPPC5Q8IUR0 188 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 FBXO15Q8NCQ5 510 aaPredicted RBP19.79■□□□□ 0.76
HPS3-206ENST00000486530 OR8J3Q8NGG0 315 aa19.79■□□□□ 0.76
HPS3-206ENST00000486530 EME1Q96AY2 570 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms