RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 SLC35E2BP0CK96 405 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 ACRV1P26436 265 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 TRIM25Q14258 630 aaKnown RBP13.21□□□□□ -0.29
PKD1-219ENST00000486339 RFX4Q33E94 735 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 ARMC8Q8IUR7 673 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 APLFQ8IW19 511 aaPredicted RBP13.21□□□□□ -0.29
PKD1-219ENST00000486339 C1orf52Q8N6N3 182 aaKnown RBP13.21□□□□□ -0.29
PKD1-219ENST00000486339 FAM156AQ8NDB6 213 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 SHKBP1Q8TBC3 707 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 S100A14Q9HCY8 104 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.29
PKD1-219ENST00000486339 RAPGEFL1Q9UHV5 662 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 POLR1DQ9Y2S0 133 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 hCG_2014768A0A024R1R8 64 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 SMAD6O43541 496 aaKnown RBP13.21□□□□□ -0.29
PKD1-219ENST00000486339 EBLN1P0CF75 366 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 BMP7P18075 431 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 CLCN4P51793 760 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 UGT2B15P54855 530 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 ERVFC1P60507 584 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 LHX8Q68G74 356 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 FRMD7Q6ZUT3 714 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 TSPAN33Q86UF1 283 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 METTL21AQ8WXB1 218 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 TEFMQ96QE5 360 aaKnown RBP13.21□□□□□ -0.29
PKD1-219ENST00000486339 MTG2Q9H4K7 406 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 PAPPA2Q9BXP8 1791 aa13.21□□□□□ -0.29
PKD1-219ENST00000486339 A0A0J9YVX5 310 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 A8MUI8 341 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 B3GALT2O43825 422 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 HIST1H2ABP04908 130 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 SPINT3P49223 89 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 CST6Q15828 149 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 USP39Q53GS9 565 aaKnown RBP13.21□□□□□ -0.3
PKD1-219ENST00000486339 HIST3H2AQ7L7L0 130 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 AVL9Q8NBF6 648 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 OR4E2Q8NGC2 313 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 HIST1H2ACQ93077 130 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 SLC39A13Q96H72 371 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 TCRBV21S2A2A0A5A6 115 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 FAM155AB1AL88 458 aaPredicted RBP13.21□□□□□ -0.3
PKD1-219ENST00000486339 AAK1Q2M2I8 961 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 ZNF678Q5SXM1 525 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 SWT1Q5T5J6 900 aaKnown RBP13.21□□□□□ -0.3
PKD1-219ENST00000486339 PRSS58Q8IYP2 241 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 NRSN1Q8IZ57 195 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 ADGRG2Q8IZP9 1017 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 VANGL1Q8TAA9 524 aaPredicted RBP13.21□□□□□ -0.3
PKD1-219ENST00000486339 TBC1D23Q9NUY8 699 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 TRPS1Q9UHF7 1281 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 ACSL5Q9ULC5 683 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 LZTS1Q9Y250 596 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 STON1Q9Y6Q2 735 aa13.21□□□□□ -0.3
PKD1-219ENST00000486339 LY75O60449 1722 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 ZCWPW2A0A1B0GU75 182 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MAN2B1O00754 1011 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 PDPK1O15530 556 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 ERI3O43414 337 aaKnown RBP13.2□□□□□ -0.3
PKD1-219ENST00000486339 SCELO95171 688 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 BPIP17213 487 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 ITGAXP20702 1163 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 ITPKBP27987 946 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 SUOXP51687 545 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MTAPQ13126 283 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 TECRLQ5HYJ1 363 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 SUSD1Q6UWL2 747 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 PRR23BQ6ZRT6 265 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 RHEBL1Q8TAI7 183 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 CD244Q9BZW8 370 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MRTO4Q9UKD2 239 aaKnown RBP13.2□□□□□ -0.3
PKD1-219ENST00000486339 SNX7Q9UNH6 387 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 CYP8B1Q9UNU6 501 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 WFS1O76024 890 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MT-ND1P03886 318 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 C6P13671 934 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 PGGT1BP53609 377 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MTPNP58546 118 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 DNAJB13P59910 316 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 FOXM1Q08050 763 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
PKD1-219ENST00000486339 HKDC1Q2TB90 917 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 FAM83CQ9BQN1 747 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 C8orf33Q9H7E9 229 aaPredicted RBP13.2□□□□□ -0.3
PKD1-219ENST00000486339 SPO11Q9Y5K1 396 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
PKD1-219ENST00000486339 IGLON5A6NGN9 336 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MATN2O00339 956 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MYL12BO14950 172 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 FGF3P11487 239 aaPredicted RBP13.2□□□□□ -0.3
PKD1-219ENST00000486339 AGTR2P50052 363 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 BPIFB6Q8NFQ5 453 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 CMTM7Q96FZ5 175 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 MAT2BQ9NZL9 334 aa13.2□□□□□ -0.3
PKD1-219ENST00000486339 IKZF3Q9UKT9 509 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms