RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TRMT10BQ6PF06 316 aaKnown RBP6.39□□□□□ -1.39
SMC4-217ENST00000485867 TRIM65Q6PJ69 517 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 IGFL2Q6UWQ7 119 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 TAOK1Q7L7X3 1001 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 STRADAQ7RTN6 431 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 SYTL1Q8IYJ3 562 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 AOPEPQ8N6M6 819 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 ACBD4Q8NC06 268 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 EXD1Q8NHP7 514 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 DNAJB14Q8TBM8 379 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 GPT2Q8TD30 523 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 RXFP2Q8WXD0 754 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 CPT1BQ92523 772 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 NR4A3Q92570 626 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 SCRN2Q96FV2 425 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 CELF6Q96J87 481 aaKnown RBP6.39□□□□□ -1.39
SMC4-217ENST00000485867 FAM81BQ96LP2 452 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 MAP3K3Q99759 626 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 JAM3Q9BX67 310 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 CXXC4Q9H2H0 198 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 OSGEPL1Q9H4B0 414 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 CATSPERBQ9H7T0 1116 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 RMI1Q9H9A7 625 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 SLC40A1Q9NP59 571 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 KCND1Q9NSA2 647 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 PADI2Q9Y2J8 665 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 SIK3Q9Y2K2 1263 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 C2CD4BA6NLJ0 364 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 PDZK1P1A8MUH7 402 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 C9J4A7 227 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 PEX12O00623 359 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 KLF7O75840 302 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 IGHEP01854 428 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 PNMA6AP0CW24 399 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 BRAFP15056 766 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 CTPS1P17812 591 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 AGAP20933 346 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 SDC4P31431 198 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 HADHAP40939 763 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 PTPN9P43378 593 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 PAPOLAP51003 745 aaKnown RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 HSD11B2P80365 405 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 LTBQ06643 244 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 FOXD4Q12950 439 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 RFTN1Q14699 578 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 SEPT7Q16181 437 aaKnown RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 ZNF658Q5TYW1 1059 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 LRRC66Q68CR7 880 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 ATL3Q6DD88 541 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 RPUSD3Q6P087 351 aaKnown RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 GFRALQ6UXV0 394 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 TRIM72Q6ZMU5 477 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 USP45Q70EL2 814 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 RBM12BQ8IXT5 1001 aaKnown RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 CELF2-AS1Q8N7Q2 184 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 DTX3Q8N9I9 347 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 CHDHQ8NE62 594 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 SPATA3Q8NHX4 192 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 CENPIQ92674 756 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 KISS1RQ969F8 398 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 CLIP3Q96DZ5 547 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 CNDP1Q96KN2 507 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 GBP5Q96PP8 586 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 SMIM14Q96QK8 99 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 PSKH2Q96QS6 385 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 CD180Q99467 661 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 FOXC2Q99958 501 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 TREX2Q9BQ50 279 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 CRACR2AQ9BSW2 395 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 DHRS4Q9BTZ2 278 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 RIOK2Q9BVS4 552 aaKnown RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 SLC39A8Q9C0K1 460 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 ENKD1Q9H0I2 346 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 CARD9Q9H257 536 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 KLC4Q9NSK0 619 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 P4HTMQ9NXG6 502 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 SLC23A2Q9UGH3 650 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 SH3BGRL2Q9UJC5 107 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 RPH3AQ9Y2J0 694 aaPredicted RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 PPIL1Q9Y3C6 166 aa6.38□□□□□ -1.39
SMC4-217ENST00000485867 SNRNP200O75643 2136 aaKnown RBP6.38□□□□□ -1.39
SMC4-217ENST00000485867 CPAMD8Q8IZJ3 1885 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ARHGAP42A6NI28 874 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 OR52A4PA6NMU1 304 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 LDB2O43679 373 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 KLHL18O94889 574 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PGLSO95336 258 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 LCA5LO95447 670 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 CLDN14O95500 239 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 ZBTB11O95625 1053 aaPredicted RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 ZNF8P17098 575 aaPredicted RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 SLC9A1P19634 815 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 DNAJA1P31689 397 aaKnown RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 ARCN1P48444 511 aaKnown RBP6.37□□□□□ -1.39
SMC4-217ENST00000485867 RENBPP51606 427 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 STC1P52823 247 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 IST1P53990 364 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 CSNK1G2P78368 415 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PNOCQ13519 176 aa6.37□□□□□ -1.39
SMC4-217ENST00000485867 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms