RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 STAG3L4Q8TBR4 150 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 SMPDL3AQ92484 453 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 N4BP2L2Q92802 583 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 DCBLD2Q96PD2 775 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 TGM7Q96PF1 710 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 BBC3Q96PG8 261 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 TXLNGYQ9BZA5 131 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 ASPSCR1Q9BZE9 553 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 ROPN1BQ9BZX4 212 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 NRSN2Q9GZP1 204 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 CAAP1Q9H8G2 361 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 CNOT10Q9H9A5 744 aaKnown RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 ROPN1Q9HAT0 212 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 FANCEQ9HB96 536 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 SMYD2Q9NRG4 433 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 C1GALT1Q9NS00 363 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 ARL15Q9NXU5 204 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 PDP2Q9P2J9 529 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 PSMC3IPQ9P2W1 217 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 TMCO1Q9UM00 188 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 PCDHB11Q9Y5F2 797 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 V9GYY5 206 aaPredicted RBP8.02□□□□□ -1.13
SF3A1-208ENST00000485618 PTPRBP23467 1997 aa8.02□□□□□ -1.13
SF3A1-208ENST00000485618 A0A096LPK6 155 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 A0A1W2PQM1 296 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 CCDC151A5D8V7 595 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TRABD2BA6NFA1 517 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TLCD2A6NGC4 264 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 BTN3A1O00481 513 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ZBTB11O95625 1053 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ANXA5P08758 320 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 CHRM5P08912 532 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 RBP1P09455 135 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 LTA4HP09960 611 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ANKRD34CP0C6C1 535 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 KRT15P19012 456 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 POLR2CP19387 275 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 RPA3P35244 121 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 HSD17B3P37058 310 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ABCG1P45844 678 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 LSSP48449 732 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 RAB15P59190 212 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 HSD11B2P80365 405 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ABATP80404 500 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ACY1Q03154 408 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ZFP36L1Q07352 338 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ACAP2Q15057 778 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 RASA2Q15283 850 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 SF1Q15637 639 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ZKSCAN8Q15776 578 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 CYP2A13Q16696 494 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 SNAP47Q5SQN1 464 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 THEMIS2Q5TEJ8 643 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 DUS1LQ6P1R4 473 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 FBXO38Q6PIJ6 1188 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ADGRD1Q6QNK2 874 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 CYHR1Q6ZMK1 362 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 PIWIL4Q7Z3Z4 852 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 PRSS42Q7Z5A4 293 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TDRPQ86YL5 185 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 GPSM1Q86YR5 675 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 SFTPA2Q8IWL1 248 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 SYTL1Q8IYJ3 562 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 RIBC1Q8N443 379 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 MREGQ8N565 214 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TBC1D19Q8N5T2 526 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 OR8K5Q8NH50 307 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 HMGCLL1Q8TB92 370 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ACMSDQ8TDX5 336 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 AENQ8WTP8 325 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ZUFSPQ96AP4 578 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 NXPE2Q96DL1 559 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TCTN2Q96GX1 697 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 LIN37Q96GY3 246 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 CRELD1Q96HD1 420 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 OLFM1Q99784 485 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 MIPEPQ99797 713 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ZPBPQ9BS86 351 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 HAUS8Q9BT25 410 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 MCMBPQ9BTE3 642 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 CAPS2Q9BXY5 557 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 B3GNT4Q9C0J1 378 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 STMN4Q9H169 189 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 SEMA6CQ9H3T2 930 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 RDH14Q9HBH5 336 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 PDE7BQ9NP56 450 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ACTR10Q9NZ32 417 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 SLC17A6Q9P2U8 582 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 GALPQ9UBC7 116 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 ATXN7L1Q9ULK2 861 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 AK5Q9Y6K8 562 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 DMXL2Q8TDJ6 3036 aa8.01□□□□□ -1.13
SF3A1-208ENST00000485618 MN1Q10571 1320 aaPredicted RBP8.01□□□□□ -1.13
SF3A1-208ENST00000485618 A0A087WV48 116 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 IGHV5-10-1A0A0J9YXX1 117 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 GOLGA6L10A6NI86 522 aa8□□□□□ -1.13
SF3A1-208ENST00000485618 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms