RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	MLIP	Q5VWP3	458 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	SPESP1	Q6UW49	350 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	LINC00523	Q86TU6	105 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	FAM20C	Q8IXL6	584 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	GPR135	Q8IZ08	494 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	C2orf73	Q8N5S3	287 aa	Predicted RBP	10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR13J1	Q8NGT2	312 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR6P1	Q8NGX9	317 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	C1orf54	Q8WWF1	131 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	HES6	Q96HZ4	224 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZNF778	Q96MU6	729 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	LRFN5	Q96NI6	719 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	NLN	Q9BYT8	704 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	PITPNM3	Q9BZ71	974 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	SPRTN	Q9H040	489 aa	Predicted RBP	10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	SYTL2	Q9HCH5	934 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	SPHK1	Q9NYA1	384 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	CIDEB	Q9UHD4	219 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZNF148	Q9UQR1	794 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	KLHL20	Q9Y2M5	609 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	PCDHGB7	Q9Y5F8	929 aa		10.21	□□□□□ -0.77
HMGN1-215	ENST00000485550	NUP210L	Q5VU65	1888 aa		10.21	□□□□□ -0.78
HMGN1-215	ENST00000485550	SLC5A10	A0PJK1	596 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	IQCF5	A8MTL0	148 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	ISM1	B1AKI9	464 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550		E7EVH7	732 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	LIAS	O43766	372 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	CEACAM4	O75871	244 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	TMEM63A	O94886	807 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	GAS8	O95995	478 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	FTH1	P02794	183 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	CHRM5	P08912	532 aa	Predicted RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	OR56A5	P0C7T3	313 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	AGXT	P21549	392 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	ACADL	P28330	430 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	STIP1	P31948	543 aa	Known RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	OTX2	P32243	289 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	SHMT2	P34897	504 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	FOXL2	P58012	376 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	HSPA14	Q0VDF9	509 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	SLC9A5	Q14940	896 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	KCTD19	Q17RG1	926 aa	Predicted RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	TSTD2	Q5T7W7	516 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	SEL1L2	Q5TEA6	688 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	SP5	Q6BEB4	398 aa	Predicted RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	FAM198B	Q6UWH4	519 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	LDB1	Q86U70	411 aa	Predicted RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	IQCK	Q8N0W5	287 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	ZBTB2	Q8N680	514 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	C19orf47	Q8N9M1	422 aa	Known RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	CFAP61	Q8NHU2	1237 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	ADAMTS17	Q8TE56	1095 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	OR2A14	Q96R47	310 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	RAB6B	Q9NRW1	208 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	IRAK4	Q9NWZ3	460 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	GUCA1B	Q9UMX6	200 aa		10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	G3BP2	Q9UN86	482 aa	Known RBP	10.2	□□□□□ -0.78
HMGN1-215	ENST00000485550	PCM1	Q15154	2024 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550		A0A0J9YY10	115 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	HEATR9	A2RTY3	570 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	QSOX1	O00391	747 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	OR2B3	O76000	313 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	GSTM1	P09488	218 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	ZSCAN5DP	P0CG00	497 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	ADRA1D	P25100	572 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	PSMA3	P25788	255 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	CCR7	P32248	378 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	GSTM4	Q03013	218 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	ATP1A4	Q13733	1029 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	SEMA3A	Q14563	771 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	NCF4	Q15080	339 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	OASL	Q15646	514 aa	Known RBP	10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	ZNF534	Q76KX8	674 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	VRK3	Q8IV63	474 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	MCEMP1	Q8IX19	187 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	TBC1D21	Q8IYX1	336 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	KRT222	Q8N1A0	295 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	TXLNB	Q8N3L3	684 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	GLIS1	Q8NBF1	620 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	OR4L1	Q8NH43	312 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	OR5K2	Q8NHB8	316 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	FLVCR1-AS1	Q8TAF5	88 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	LKAAEAR1	Q8TD35	194 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	IL17F	Q96PD4	163 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	TTC1	Q99614	292 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	GPR83	Q9NYM4	423 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	DHCR7	Q9UBM7	475 aa	Known RBP	10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	POLG2	Q9UHN1	485 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	ENTPD4	Q9Y227	616 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550	MTOR	P42345	2549 aa		10.19	□□□□□ -0.78
HMGN1-215	ENST00000485550		C9J4A7	227 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	PRSS44	E7EML9	344 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	MASP2	O00187	686 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	SUN1	O94901	812 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	APRT	P07741	180 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	MSL3P1	P0C860	447 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	ALAS2	P22557	587 aa		10.18	□□□□□ -0.78
HMGN1-215	ENST00000485550	PEBP1	P30086	187 aa	Known RBP	10.18	□□□□□ -0.78

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