RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 GAS8O95995 478 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 IFNB1P01574 187 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 CD63P08962 238 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 ETS1P14921 441 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 ALAS2P22557 587 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 ADRA1DP25100 572 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 RAB28P51157 221 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 KIF5AQ12840 1032 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 DNAJC21Q5F1R6 531 aaKnown RBP18.5■□□□□ 0.55
COL27A1-205ENST00000485397 LDB1Q86U70 411 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-205ENST00000485397 TAX1BP1Q86VP1 789 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 LURAP1LQ8IV03 231 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 TMEM139Q8IV31 216 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 MCATQ8IVS2 390 aaKnown RBP18.5■□□□□ 0.55
COL27A1-205ENST00000485397 CISD2Q8N5K1 135 aaKnown RBP18.5■□□□□ 0.55
COL27A1-205ENST00000485397 OR6P1Q8NGX9 317 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 HES6Q96HZ4 224 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 RANBP9Q96S59 729 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 TTC1Q99614 292 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 BAG1Q99933 345 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-205ENST00000485397 MENTQ9BUN1 341 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 ASF1BQ9NVP2 202 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 RIMKLBQ9ULI2 386 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 A1L4Q6 167 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 ERI2A8K979 691 aaKnown RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 LIASO43766 372 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 GPC4O75487 556 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 ITGAXP20702 1163 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 VARSP26640 1264 aaKnown RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 STIP1P31948 543 aaKnown RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 FDFT1P37268 417 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 GCGRP47871 477 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 ACVR1Q04771 509 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 GRB7Q14451 532 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 OASLQ15646 514 aaKnown RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 FASTKD1Q53R41 847 aaKnown RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 IQCKQ8N0W5 287 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 KRT222Q8N1A0 295 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 CARD6Q9BX69 1037 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 ZBTB20Q9HC78 741 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 CUEDC1Q9NWM3 386 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-205ENST00000485397 B3GNT3Q9Y2A9 372 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 CAPN6Q9Y6Q1 641 aa18.49■□□□□ 0.55
COL27A1-205ENST00000485397 E7EVH7 732 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 F8W8V4 182 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 IGHEP01854 428 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 ALPPP05187 535 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 CD9P21926 228 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 GRIA3P42263 894 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 NR6A1Q15406 480 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 CYP2A13Q16696 494 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 FCRL6Q6DN72 434 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 TTLL10Q6ZVT0 673 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 C1orf54Q8WWF1 131 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 INPP5DQ92835 1189 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-205ENST00000485397 TCAF1Q9Y4C2 921 aa18.48■□□□□ 0.55
COL27A1-205ENST00000485397 ALOX12BO75342 701 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 CBX6O95503 412 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 MCM3P25205 808 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 PRAMEP78395 509 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 IGFL3Q6UXB1 125 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 DCUN1D3Q8IWE4 304 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-205ENST00000485397 ASZ1Q8WWH4 475 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 DLG3Q92796 817 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 ATP13A2Q9NQ11 1180 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 RAB6BQ9NRW1 208 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 MARCH4Q9P2E8 410 aaPredicted RBP18.47■□□□□ 0.55
COL27A1-205ENST00000485397 ZNF148Q9UQR1 794 aa18.47■□□□□ 0.55
COL27A1-205ENST00000485397 ANKRD12Q6UB98 2062 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 AGPSO00116 658 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 APOA4P06727 396 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 AOAHP28039 575 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 ARSFP54793 590 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 SOX8P57073 446 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 SNX1Q13596 522 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 SF1Q15637 639 aaKnown RBP18.46■□□□□ 0.55
COL27A1-205ENST00000485397 CRB2Q5IJ48 1285 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 FIGLAQ6QHK4 219 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 UNC5DQ6UXZ4 953 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 NLRP9Q7RTR0 991 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 OVCH1Q7RTY7 1134 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 OR2L8Q8NGY9 312 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 SLC22A18Q96BI1 424 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 TSSK1BQ9BXA7 367 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 ILKAPQ9H0C8 392 aaPredicted RBP18.46■□□□□ 0.55
COL27A1-205ENST00000485397 CHRAC1Q9NRG0 131 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 ERRFI1Q9UJM3 462 aaPredicted RBP18.46■□□□□ 0.55
COL27A1-205ENST00000485397 HIVEP3Q5T1R4 2406 aa18.46■□□□□ 0.55
COL27A1-205ENST00000485397 UTP20O75691 2785 aaKnown RBP18.46■□□□□ 0.55
COL27A1-205ENST00000485397 A0A1B0GX78 115 aa18.45■□□□□ 0.54
COL27A1-205ENST00000485397 PRMT5O14744 637 aaPredicted RBP18.45■□□□□ 0.54
COL27A1-205ENST00000485397 KLHL41O60662 606 aa18.45■□□□□ 0.54
COL27A1-205ENST00000485397 IPO13O94829 963 aaKnown RBP18.45■□□□□ 0.54
COL27A1-205ENST00000485397 SLCO2B1O94956 709 aa18.45■□□□□ 0.54
COL27A1-205ENST00000485397 DDAH2O95865 285 aa18.45■□□□□ 0.54
COL27A1-205ENST00000485397 S1PR4O95977 384 aa18.45■□□□□ 0.54
COL27A1-205ENST00000485397 RPN2P04844 631 aa18.45■□□□□ 0.54
COL27A1-205ENST00000485397 ZSCAN5DPP0CG00 497 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms