RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 C1QAP02745 245 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 CD82P27701 267 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 EIF2S3P41091 472 aaKnown RBP20.22■□□□□ 0.83
SEC13-217ENST00000482647 SLC12A2P55011 1212 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 SH3BP2P78314 561 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 SLMAPQ14BN4 828 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.22■□□□□ 0.83
SEC13-217ENST00000482647 GRTP1Q5TC63 336 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 FBXO38Q6PIJ6 1188 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 UBE2R2Q712K3 238 aaPredicted RBP20.22■□□□□ 0.83
SEC13-217ENST00000482647 SPNS2Q8IVW8 549 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 D2HGDHQ8N465 521 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 C2orf73Q8N5S3 287 aaPredicted RBP20.22■□□□□ 0.83
SEC13-217ENST00000482647 FBXO15Q8NCQ5 510 aaPredicted RBP20.22■□□□□ 0.83
SEC13-217ENST00000482647 PPM1MQ96MI6 270 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 OR6C1Q96RD1 312 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 SOHLH2Q9NX45 425 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 FOXJ2Q9P0K8 574 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 ACSL6Q9UKU0 697 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 ACACAQ13085 2346 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 ZZEF1O43149 2961 aa20.22■□□□□ 0.83
SEC13-217ENST00000482647 MAP1BP46821 2468 aaKnown RBP20.21■□□□□ 0.83
SEC13-217ENST00000482647 ANKRD11Q6UB99 2663 aaPredicted RBP20.21■□□□□ 0.83
SEC13-217ENST00000482647 EPG5Q9HCE0 2579 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 C8GP07360 202 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 SPRP35270 261 aaPredicted RBP20.21■□□□□ 0.83
SEC13-217ENST00000482647 TAS2R39P59534 338 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 POU4F1Q01851 419 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 ACY1Q03154 408 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 ARHGAP19Q14CB8 494 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 CYP2A13Q16696 494 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 BPHLQ86WA6 291 aaPredicted RBP20.21■□□□□ 0.83
SEC13-217ENST00000482647 RASGRP3Q8IV61 690 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 HMGCLL1Q8TB92 370 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 TRAPPC9Q96Q05 1148 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 CYTH2Q99418 400 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 PKP4Q99569 1192 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 RBBP8Q99708 897 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 CTRCQ99895 268 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 POPDC3Q9HBV1 291 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 SYTL2Q9HCH5 934 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 PDE7BQ9NP56 450 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 BTRCQ9Y297 605 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 MTO1Q9Y2Z2 717 aaKnown RBP20.21■□□□□ 0.83
SEC13-217ENST00000482647 B3GALT1Q9Y5Z6 326 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 CELSR3Q9NYQ7 3312 aa20.21■□□□□ 0.83
SEC13-217ENST00000482647 SRRM3A6NNA2 597 aaPredicted RBP20.2■□□□□ 0.82
SEC13-217ENST00000482647 ZNF839A8K0R7 811 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 SLC16A5O15375 505 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 SYF2O95926 243 aaKnown RBP20.2■□□□□ 0.82
SEC13-217ENST00000482647 EBLN1P0CF75 366 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 FOLR1P15328 257 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 SP140Q13342 867 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 KCNAB1Q14722 419 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 SLC5A12Q1EHB4 618 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 TEX35Q5T0J7 233 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 LRRC69Q6ZNQ3 347 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 NKAPQ8N5F7 415 aaKnown RBP20.2■□□□□ 0.82
SEC13-217ENST00000482647 FLVCR1-AS1Q8TAF5 88 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 MCOLN3Q8TDD5 553 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 DENND1AQ8TEH3 1009 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 PMEPA1Q969W9 287 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 TSPAN17Q96FV3 270 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 PDLIM5Q96HC4 596 aaKnown RBP20.2■□□□□ 0.82
SEC13-217ENST00000482647 DCBLD2Q96PD2 775 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 SLC12A9Q9BXP2 914 aa20.2■□□□□ 0.82
SEC13-217ENST00000482647 CDC42EP4Q9H3Q1 356 aaKnown RBP20.2■□□□□ 0.82
SEC13-217ENST00000482647 A0A0J9YY10 115 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 KRT87PA6NCN2 255 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 ACSL3O95573 720 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 TSPAN12O95859 305 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 ST6GAL1P15907 406 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 CYP2A7P20853 494 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 PEBP1P30086 187 aaKnown RBP20.19■□□□□ 0.82
SEC13-217ENST00000482647 PGGT1BP53609 377 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 TUBB4BP68371 445 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 TUBB3Q13509 450 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 USP10Q14694 798 aaKnown RBP20.19■□□□□ 0.82
SEC13-217ENST00000482647 SF1Q15637 639 aaKnown RBP20.19■□□□□ 0.82
SEC13-217ENST00000482647 TRIM73Q86UV7 250 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 TAX1BP1Q86VP1 789 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 KCNE4Q8WWG9 221 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 TCTN2Q96GX1 697 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 DPH1Q9BZG8 443 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 PARVBQ9HBI1 364 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 APMAPQ9HDC9 416 aa20.19■□□□□ 0.82
SEC13-217ENST00000482647 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.19■□□□□ 0.82
SEC13-217ENST00000482647 A0A087WV48 116 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 STMND1H3BQB6 276 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 FKBP9O95302 570 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 SLC16A8O95907 504 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 HIST1H2AGP0C0S8 130 aaPredicted RBP20.18■□□□□ 0.82
SEC13-217ENST00000482647 ERGP11308 486 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 FGF5P12034 268 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 PVRP15151 417 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 ZNF37AP17032 561 aaPredicted RBP20.18■□□□□ 0.82
SEC13-217ENST00000482647 HIST1H2ADP20671 130 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 OAS2P29728 719 aaKnown RBP20.18■□□□□ 0.82
SEC13-217ENST00000482647 TMEM207Q6UWW9 146 aa20.18■□□□□ 0.82
SEC13-217ENST00000482647 ZFAND4Q86XD8 727 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms