RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	FAAH2	Q6GMR7	532 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	CCDC70	Q6NSX1	233 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173		Q8NBF4	154 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	C1orf131	Q8NDD1	294 aa	Known RBP	2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	PAPD5	Q8NDF8	572 aa	Known RBP	2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	PRSS33	Q8NF86	280 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	GPRC5A	Q8NFJ5	357 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR2L2	Q8NH16	312 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	RAB11FIP5	Q9BXF6	653 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	CPVL	Q9H3G5	476 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	SERINC1	Q9NRX5	453 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	MAN2C1	Q9NTJ4	1040 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	GRID1	Q9ULK0	1009 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	ZNF148	Q9UQR1	794 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173	PCDH11Y	Q9BZA8	1340 aa		2.67	□□□□□ -1.98
CCNL1-223	ENST00000481173		A0A1W2PR80	420 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	ENO4	A6NNW6	628 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173		B4DLN1	442 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	VILL	O15195	856 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	PRAMEF11	O60813	436 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	C22orf31	O95567	290 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	BCL10	O95999	233 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	SMIM18	P0DKX4	95 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	VPREB1	P12018	145 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	DARS	P14868	501 aa	Known RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	TNFAIP3	P21580	790 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	CDH3	P22223	829 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	PTPN3	P26045	913 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	ACSL1	P33121	698 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	MNDA	P41218	407 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	SLC15A1	P46059	708 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	MRPL12	P52815	198 aa	Known RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	LBX1	P52954	281 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	MAZ	P56270	477 aa	Known RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	ARF3	P61204	181 aa	Predicted RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	DCAF7	P61962	342 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	SIRPA	P78324	504 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	ARF1	P84077	181 aa	Known RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	ZNF415	Q09FC8	603 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	TAF10	Q12962	218 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	CALCOCO2	Q13137	446 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	FASTKD3	Q14CZ7	662 aa	Known RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	HSP90AB4P	Q58FF6	505 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	RAB41	Q5JT25	222 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	TEX38	Q6PEX7	206 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	SLC25A47	Q6Q0C1	308 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR13C3	Q8NGS6	347 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR52N5	Q8NH56	324 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	ATP8B4	Q8TF62	1192 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	RASL10A	Q92737	203 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	C10orf90	Q96M02	699 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	NEK1	Q96PY6	1258 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	PAFAH2	Q99487	392 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	RAD9A	Q99638	391 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	WWTR1	Q9GZV5	400 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	PPAN	Q9NQ55	473 aa	Known RBP	2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	OR6C2	Q9NZP2	312 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	GRIP1	Q9Y3R0	1128 aa		2.66	□□□□□ -1.98
CCNL1-223	ENST00000481173	IGHV3OR16-10	A0A075B7F0	116 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	OR2A25	A4D2G3	310 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	CTDSP2	O14595	271 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	KRTAP1-4	P0C5Y4	121 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	GJA1	P17302	382 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	ARSE	P51690	589 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	GSC	P56915	257 aa	Predicted RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	PAX8	Q06710	450 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	AIMP2	Q13155	320 aa	Known RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	MTF1	Q14872	753 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	NR1D2	Q14995	579 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	TNIP1	Q15025	636 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	MOGAT2	Q3SYC2	334 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	ELFN2	Q5R3F8	820 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	FAM180B	Q6P0A1	224 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	CEP57	Q86XR8	500 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	OR6S1	Q8NH40	331 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	MIPOL1	Q8TD10	442 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	CCDC107	Q8WV48	283 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	MPP4	Q96JB8	637 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	PRICKLE1	Q96MT3	831 aa	Predicted RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	TRIM6	Q9C030	488 aa	Predicted RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	THAP2	Q9H0W7	228 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	MYH16	Q9H6N6	1097 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	SUCLA2	Q9P2R7	463 aa	Predicted RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	PRO0461	Q9UI25	63 aa		2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	ZNF215	Q9UL58	517 aa	Predicted RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173	LAS1L	Q9Y4W2	734 aa	Known RBP	2.65	□□□□□ -1.99
CCNL1-223	ENST00000481173		A0A1W2PQ09	198 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	FEZF1	A0PJY2	475 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	MPTX1	A8MV57	137 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	MEIS2	O14770	477 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	EPHB6	O15197	1021 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	TSPAN1	O60635	241 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	CDK2AP2	O75956	126 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	SEC24A	O95486	1093 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	IGHV3-13	P01766	116 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	OR2T7	P0C7T2	308 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	DNASE1	P24855	282 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	CDC25C	P30307	473 aa		2.64	□□□□□ -1.99
CCNL1-223	ENST00000481173	SLC9A3	P48764	834 aa		2.64	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms