RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PEX12O00623 359 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 KRT86O43790 486 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 KDM1AO60341 852 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 SEMA7AO75326 666 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 RAB28P51157 221 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 PRAMEP78395 509 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 MRPL49Q13405 166 aaKnown RBP18.12■□□□□ 0.49
ABCF3-214ENST00000480562 NKAIN1Q4KMZ8 207 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 DCAF10Q5QP82 559 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 SEL1L2Q5TEA6 688 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 VWA5B1Q5TIE3 1220 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 OR2Y1Q8NGV0 311 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 FER1L6-AS2Q96M78 137 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 IP6K3Q96PC2 410 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 NDC1Q9BTX1 674 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 MENTQ9BUN1 341 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 P4HTMQ9NXG6 502 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 MARCH4Q9P2E8 410 aaPredicted RBP18.12■□□□□ 0.49
ABCF3-214ENST00000480562 NBPF19A0A087WUL8 3843 aa18.12■□□□□ 0.49
ABCF3-214ENST00000480562 GPC4O75487 556 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 APRTP07741 180 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 RNF224P0DH78 156 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 ALAS2P22557 587 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 GRB7Q14451 532 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 EIF2S3LQ2VIR3 472 aaKnown RBP18.11■□□□□ 0.49
ABCF3-214ENST00000480562 PLEKHN1Q494U1 663 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-214ENST00000480562 MRPL14Q6P1L8 145 aaKnown RBP18.11■□□□□ 0.49
ABCF3-214ENST00000480562 PPP1R32Q7Z5V6 425 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 SLC13A5Q86YT5 568 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-214ENST00000480562 MCATQ8IVS2 390 aaKnown RBP18.11■□□□□ 0.49
ABCF3-214ENST00000480562 GALNT16Q8N428 558 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 CLEC1AQ8NC01 280 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 ASZ1Q8WWH4 475 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 PTERQ96BW5 349 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 C19orf60Q96EN9 201 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 CARD6Q9BX69 1037 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 SLC22A11Q9NSA0 550 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 C5AR2Q9P296 337 aa18.11■□□□□ 0.49
ABCF3-214ENST00000480562 APOA4P06727 396 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 UMODP07911 640 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 ZSCAN5DPP0CG00 497 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 ITGAXP20702 1163 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 CD9P21926 228 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 GRIA3P42263 894 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 MYBPC3Q14896 1274 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 C4orf17Q53FE4 359 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 NLRP9Q7RTR0 991 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 GAS2L3Q86XJ1 694 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 DCUN1D3Q8IWE4 304 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 CCDC89Q8N998 374 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 PPHLN1Q8NEY8 458 aaKnown RBP18.1■□□□□ 0.49
ABCF3-214ENST00000480562 SSC4DQ8WTU2 575 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 TSSK1BQ9BXA7 367 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 FRMD8P1Q9BZ68 369 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-214ENST00000480562 CHRAC1Q9NRG0 131 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 CATSPERZQ9NTU4 200 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-214ENST00000480562 ANAPC5Q9UJX4 755 aa18.1■□□□□ 0.49
ABCF3-214ENST00000480562 RPN2P04844 631 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 CD63P08962 238 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 MCM3P25205 808 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 AOAHP28039 575 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 PPARGP37231 505 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-214ENST00000480562 GCGRP47871 477 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 SESN2P58004 480 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-214ENST00000480562 CRADDP78560 199 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 UNC5DQ6UXZ4 953 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 TTLL10Q6ZVT0 673 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 RNF10Q8N5U6 811 aaKnown RBP18.09■□□□□ 0.49
ABCF3-214ENST00000480562 OR2L8Q8NGY9 312 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 SLC29A3Q9BZD2 475 aa18.09■□□□□ 0.49
ABCF3-214ENST00000480562 ZNF552Q9H707 407 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-214ENST00000480562 PLEKHB1Q9UF11 243 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-214ENST00000480562 KRT87PA6NCN2 255 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 PRMT5O14744 637 aaPredicted RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 CD3EAPO15446 510 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 SLCO2B1O94956 709 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 ALPPP05187 535 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 RPL22P35268 128 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 SF1Q15637 639 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 CYP2A13Q16696 494 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 AARS2Q5JTZ9 985 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 FCRL6Q6DN72 434 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 PTRHD1Q6GMV3 140 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 FIGLAQ6QHK4 219 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 CISD2Q8N5K1 135 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 PRR7Q8TB68 274 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 DLG3Q92796 817 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 SLC22A18Q96BI1 424 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 SNRNP40Q96DI7 357 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 ZBTB20Q9HC78 741 aaPredicted RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 PAK5Q9P286 719 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 SLC39A10Q9ULF5 831 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 GUCA1BQ9UMX6 200 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 RUVBL2Q9Y230 463 aaKnown RBP18.08■□□□□ 0.48
ABCF3-214ENST00000480562 ANKRD12Q6UB98 2062 aa18.08■□□□□ 0.48
ABCF3-214ENST00000480562 A0A1B0GX78 115 aa18.07■□□□□ 0.48
ABCF3-214ENST00000480562 RASGRF2O14827 1237 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms