RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 C1QCP02747 245 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 OGNP20774 298 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 CLK3P49761 638 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 RPL38P63173 70 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 GPR17Q13304 367 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 ACOX1Q15067 660 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 CARD16Q5EG05 197 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 CTSL3PQ5NE16 218 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 GPSM1Q86YR5 675 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 LYSMD2Q8IV50 215 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 OR4F6Q8NGB9 312 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 CLHC1Q8NHS4 586 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 DUSP21Q9H596 190 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 ZBTB20Q9HC78 741 aaPredicted RBP13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 FARSBQ9NSD9 589 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
PDZRN3-208ENST00000479530 M0QX08 132 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 OR7A17O14581 309 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 SYN3O14994 580 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 NBNO60934 754 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 NDUFS3O75489 264 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 DIRAS1O95057 198 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 EPOP01588 193 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 SERPINB1P30740 379 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 BMPR1AP36894 532 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 MAPKAPK2P49137 400 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 STEAP3Q658P3 488 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 FAM83FQ8NEG4 500 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF566Q969W8 418 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 EFHD2Q96C19 240 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 EID2BQ96D98 161 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 REXO5Q96IC2 774 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 DACH2Q96NX9 599 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 CINPQ9BW66 212 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 ZFP14Q9HCL3 533 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 DCAF13Q9NV06 445 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 UBA2Q9UBT2 640 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 AGO1Q9UL18 857 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 INSIG1O15503 277 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 CREG1O75629 220 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 CD160O95971 181 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 F11P03951 625 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 SLC2A4P14672 509 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 HOXB8P17481 243 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 IGFBP5P24593 272 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 PPP5CP53041 499 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 HMGCS1Q01581 520 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 LRIT3Q3SXY7 679 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 FUT10Q6P4F1 479 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 EFL1Q7Z2Z2 1120 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 NANOGNBQ7Z5D8 188 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 ADHFE1Q8IWW8 467 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 PSD4Q8NDX1 1056 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 CAPSLQ8WWF8 208 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 PSKH2Q96QS6 385 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 ACOT13Q9NPJ3 140 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
PDZRN3-208ENST00000479530 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 FAM47E-STBD1D6RA91 191 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 FFAR3O14843 346 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 GPR42O15529 346 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 COCHO43405 550 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 GSNP06396 782 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CR2P20023 1033 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 MC4RP32245 332 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 TGFBR2P37173 567 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 SERPINB10P48595 397 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 DAPP51397 102 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 MAPKAPK3Q16644 382 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 SYT16Q17RD7 645 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 ZRANB3Q5FWF4 1079 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CES5AQ6NT32 575 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 OR6K2Q8NGY2 324 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CD200R1Q8TD46 325 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 HOXD1Q9GZZ0 328 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 TRPV5Q9NQA5 729 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 OLA1Q9NTK5 396 aaKnown RBP13□□□□□ -0.33
PDZRN3-208ENST00000479530 ABCG2Q9UNQ0 655 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CAB39Q9Y376 341 aaPredicted RBP13□□□□□ -0.33
PDZRN3-208ENST00000479530 RAI2Q9Y5P3 530 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 TET1Q8NFU7 2136 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 AREL1O15033 823 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 UPK1BO75841 260 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CD36P16671 472 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 GTF2E2P29084 291 aaKnown RBP13□□□□□ -0.33
PDZRN3-208ENST00000479530 NEK2P51955 445 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 HNRNPFP52597 415 aaKnown RBP13□□□□□ -0.33
PDZRN3-208ENST00000479530 RING1Q06587 406 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms