RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 VPS26AO75436 327 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 LIFP15018 202 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 CCNFP41002 786 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 PLTPP55058 493 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 FRG1Q14331 258 aaKnown RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 SLC5A12Q1EHB4 618 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 C6orf15Q6UXA7 325 aaPredicted RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 CDHR3Q6ZTQ4 885 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 GALNT7Q86SF2 657 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 BPHLQ86WA6 291 aaPredicted RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 CPNE9Q8IYJ1 553 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 ESX1Q8N693 406 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 C19orf47Q8N9M1 422 aaKnown RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 DENND1AQ8TEH3 1009 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 SNRNP27Q8WVK2 155 aaKnown RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 TRIM44Q96DX7 344 aaPredicted RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 RAB17Q9H0T7 212 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 FAM60AQ9NP50 221 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 SAYSD1Q9NPB0 183 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 TRMT6Q9UJA5 497 aaKnown RBP15.05■□□□□ -0
HMGA1-206ENST00000478214 MRFAP1Q9Y605 127 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 IGSF10Q6WRI0 2623 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 MAP3K7O43318 606 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 PSIP1O75475 530 aaKnown RBP15.04■□□□□ -0
HMGA1-206ENST00000478214 NTRK1P04629 796 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 ENO3P13929 434 aaPredicted RBP15.04■□□□□ -0
HMGA1-206ENST00000478214 MCM3P25205 808 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 STAT5AP42229 794 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 CDKN2DP55273 166 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 SLC7A5Q01650 507 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 MGAT5Q09328 741 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 MAP7Q14244 749 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 PRAMEF17Q5VTA0 474 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 ZDHHC24Q6UX98 284 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 CYHR1Q6ZMK1 362 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 CAPN12Q6ZSI9 719 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 NEK10Q6ZWH5 1172 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 PIWIL4Q7Z3Z4 852 aaKnown RBP15.04■□□□□ -0
HMGA1-206ENST00000478214 OR9A1PQ8NGU1 263 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 OR8K5Q8NH50 307 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 OR1L3Q8NH93 324 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 MAGEC3Q8TD91 643 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 PYROXD1Q8WU10 500 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 FCRL4Q96PJ5 515 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 LRRC1Q9BTT6 524 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 RAB11FIP5Q9BXF6 653 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 FANCEQ9HB96 536 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 TAS2R13Q9NYV9 303 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 MOCS1Q9NZB8 636 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 ZFATQ9P243 1243 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 KLHL20Q9Y2M5 609 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 PCDHGA4Q9Y5G9 962 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 PSAT1Q9Y617 370 aa15.04■□□□□ -0
HMGA1-206ENST00000478214 ESYT3A0FGR9 886 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 TMEM150CB9EJG8 249 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 EIF3HO15372 352 aaKnown RBP eCLIP15.03■□□□□ -0
HMGA1-206ENST00000478214 HCRTR1O43613 425 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 PRICKLE3O43900 615 aaPredicted RBP15.03■□□□□ -0
HMGA1-206ENST00000478214 CATP04040 527 aaKnown RBP15.03■□□□□ -0
HMGA1-206ENST00000478214 MSL3P1P0C860 447 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 MPC1LP0DKB6 136 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 CBSLP0DN79 551 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 MAGP20916 626 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 CBSP35520 551 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 PGGT1BP53609 377 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 ABHD18Q0P651 414 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 DEFB110Q30KQ9 67 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 KIAA1614Q5VZ46 1190 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 C8orf74Q6P047 294 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 TMEM126BQ8IUX1 230 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 RAB42Q8N4Z0 105 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 GPATCH11Q8N954 259 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 FBXO25Q8TCJ0 367 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 ASB11Q8WXH4 323 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 SLC22A18Q96BI1 424 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 TCTN2Q96GX1 697 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 GPN2Q9H9Y4 310 aaPredicted RBP15.03■□□□□ -0
HMGA1-206ENST00000478214 SYTL2Q9HCH5 934 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 FAM114A2Q9NRY5 505 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 SPATA7Q9P0W8 599 aa15.03■□□□□ -0
HMGA1-206ENST00000478214 KIF2AO00139 706 aaPredicted RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 MYO1CO00159 1063 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 SCRG1O75711 98 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 PIAS1O75925 651 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 TUBB4AP04350 444 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 PSMB5P28074 263 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 OAS2P29728 719 aaKnown RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 SSTR1P30872 391 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 GABRA4P48169 554 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 CAV1Q03135 178 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 FASTKQ14296 549 aaKnown RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 SF1Q15637 639 aaKnown RBP15.02■□□□□ -0
HMGA1-206ENST00000478214 CYP2A13Q16696 494 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 HECTD2Q5U5R9 776 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 UGT3A1Q6NUS8 523 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 PAQR3Q6TCH7 311 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 STRA8Q7Z7C7 330 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 CCDC25Q86WR0 208 aa15.02■□□□□ -0
HMGA1-206ENST00000478214 PALM2Q8IXS6 379 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms