RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 KLF18A0A0U1RQI7 1052 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 A0A1W2PRG0 241 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 TMEM8BA6NDV4 472 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 CAND2O75155 1236 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 NXPH4O95158 308 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 TRUB2O95900 331 aaKnown RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 SETSIPP0DME0 302 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 NR2C1P13056 603 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 LMO2P25791 158 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 SLC6A6P31641 620 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 NEK3P51956 506 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 PDX1P52945 283 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 ABCE1P61221 599 aaKnown RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 FAM189A2Q15884 450 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 MDH1BQ5I0G3 518 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 C9orf66Q5T8R8 295 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 GRTP1Q5TC63 336 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 NAA35Q5VZE5 725 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 ATG16L1Q676U5 607 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 HIPK1Q86Z02 1210 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 ZNF547Q8IVP9 402 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 RNF168Q8IYW5 571 aaPredicted RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 TDRD5Q8NAT2 981 aaKnown RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 OR13C3Q8NGS6 347 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 TRPC4APQ8TEL6 797 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 PHF10Q8WUB8 498 aaKnown RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 TRAPPC12Q8WVT3 735 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 MTERF3Q96E29 417 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 ELAC2Q9BQ52 826 aaKnown RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 FAM167BQ9BTA0 163 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 PAGR1Q9BTK6 254 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 CRB3Q9BUF7 120 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 CCDC28BQ9BUN5 200 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 NUP85Q9BW27 656 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 OCR1Q9BZK8 76 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 OR2B2Q9GZK3 357 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 SHARPINQ9H0F6 387 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 Q9UF83 564 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 LNPEPQ9UIQ6 1025 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 INTS6Q9UL03 887 aaKnown RBP0.67□□□□□ -2.3
CALD1-218ENST00000478075 FER1L5A0AVI2 2057 aa0.67□□□□□ -2.3
CALD1-218ENST00000478075 ZNF541Q9H0D2 1346 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 PLEKHD1A6NEE1 506 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 NPIPB9F8W1W9 429 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 SNAP23O00161 211 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 LYPD3O95274 346 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 DHODHQ02127 395 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 PNRC1Q12796 327 aaPredicted RBP0.66□□□□□ -2.3
CALD1-218ENST00000478075 PLA2G7Q13093 441 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 CDH18Q13634 790 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 PRKG1Q13976 671 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 CAMK1Q14012 370 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 POSTNQ15063 836 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 NAB2Q15742 525 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 ZNF658BQ4V348 819 aaPredicted RBP0.66□□□□□ -2.3
CALD1-218ENST00000478075 IRGCQ6NXR0 463 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 KSR2Q6VAB6 950 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 LEKR1Q6ZMV7 388 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 SEPT14Q6ZU15 432 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 TSPYL6Q8N831 410 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 OR8K5Q8NH50 307 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 FLVCR1-AS1Q8TAF5 88 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.66□□□□□ -2.3
CALD1-218ENST00000478075 STARD4Q96DR4 205 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 DGAT2Q96PD7 388 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 PIP5K1AQ99755 562 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 PANK2Q9BZ23 570 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 HHATLQ9HCP6 504 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 VNN3Q9NY84 501 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 KCND2Q9NZV8 630 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 CACNG4Q9UBN1 327 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 HSF4Q9ULV5 492 aa0.66□□□□□ -2.3
CALD1-218ENST00000478075 IGHV3-38A0A0C4DH36 116 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 PANO1I0J062 215 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 PRKAR1AP10644 381 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 UMPSP11172 480 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 ABCD1P33897 745 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 PTGER4P35408 488 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 RPL21P46778 160 aaKnown RBP0.65□□□□□ -2.31
CALD1-218ENST00000478075 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.65□□□□□ -2.31
CALD1-218ENST00000478075 SLC12A1Q13621 1099 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 ITPRIPL2Q3MIP1 535 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 TIMM50Q3ZCQ8 353 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 TSSK4Q6SA08 328 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 TRIML1Q8N9V2 468 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 SPPL2AQ8TCT8 520 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 IRGQQ8WZA9 623 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 FAM218AQ96MZ4 157 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 MAPKAP1Q9BPZ7 522 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 FUZQ9BT04 418 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 S1PR5Q9H228 398 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 SPHK1Q9NYA1 384 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 MTUS1Q9ULD2 1270 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 CLEC4EQ9ULY5 219 aa0.65□□□□□ -2.31
CALD1-218ENST00000478075 MEGF6O75095 1541 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 IGHV3-16A0A0C4DH30 117 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 KIR2DS1A0A191URI9 304 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 SLC25A12O75746 678 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 HIST1H2ABP04908 130 aa0.64□□□□□ -2.31
CALD1-218ENST00000478075 CD5P06127 495 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms