RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ARSAP15289 507 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CAPN3P20807 821 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ATP6V1B2P21281 511 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RPS3P23396 243 aaKnown RBP eCLIP4.85□□□□□ -1.635e-9■□□□□ 9.6
SF3B6-202ENST00000478050 FASP25445 335 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PSMA4P25789 261 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CORO1AP31146 461 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GRIA3P42263 894 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PTGER3P43115 390 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 KIR3DL1P43629 444 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RGRP47804 291 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PPP3CCP48454 512 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MASP1P48740 699 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SCNN1BP51168 640 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ATXN3P54252 364 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NR1H2P55055 460 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ADARP55265 1226 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 FOXA1P55317 472 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 IL2P60568 153 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RPS24P62847 133 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ERVK-8P63133 956 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TUBA4AP68366 448 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CDKL1Q00532 357 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CACNG1Q06432 222 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 DMWDQ09019 674 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LSAMPQ13449 338 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NFYCQ13952 458 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RCAN2Q14206 197 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TCEA2Q15560 299 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TSNQ15631 228 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RBBP7Q16576 425 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SLC5A9Q2M3M2 681 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 AASDHQ4L235 1098 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SETMARQ53H47 684 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 INO80DQ53TQ3 878 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ZRANB3Q5FWF4 1079 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MTX3Q5HYI7 312 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CTSL3PQ5NE16 218 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RTP2Q5QGT7 225 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 C6orf52Q5T4I8 152 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 INTS11Q5TA45 600 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RNF219Q5W0B1 726 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 AP1ARQ63HQ0 302 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SLC8B1Q6J4K2 584 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 HMBOX1Q6NT76 420 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NCEH1Q6PIU2 408 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 RSPO2Q6UXX9 243 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CYP2R1Q6VVX0 501 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 B3GNT6Q6ZMB0 384 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ZBTB49Q6ZSB9 765 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GPRIN3Q6ZVF9 776 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NLRC3Q7RTR2 1065 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ADAMTSL2Q86TH1 951 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SATL1Q86VE3 508 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CARM1Q86X55 608 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PTRH1Q86Y79 214 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GPSM1Q86YR5 675 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 DENND1CQ8IV53 801 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SLC15A3Q8IY34 581 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LRRC43Q8N309 656 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PNPLA1Q8N8W4 532 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MDGA1Q8NFP4 955 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 DBF4BQ8NFT6 615 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 HM13Q8TCT9 377 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CD200R1Q8TD46 325 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 KCNJ9Q92806 393 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 FUBP1Q96AE4 644 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PPWD1Q96BP3 646 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LRRC58Q96CX6 371 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 DTNBP1Q96EV8 351 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LINGO1Q96FE5 620 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PDLIM5Q96HC4 596 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SLC45A3Q96JT2 553 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 B3GALT6Q96L58 329 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF512Q96ME7 567 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 BIRC8Q96P09 236 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 KCNA7Q96RP8 456 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF382Q96SR6 550 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 HGH1Q9BTY7 390 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 C9orf16Q9BUW7 83 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SGPP1Q9BX95 441 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TUBB1Q9H4B7 451 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SEMA4BQ9NPR2 832 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PNPLA3Q9NST1 481 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CD274Q9NZQ7 290 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SUN2Q9UH99 717 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PCTPQ9UKL6 214 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 DMTF1Q9Y222 760 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 FAM50BQ9Y247 325 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 BTRCQ9Y297 605 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MYRFQ9Y2G1 1151 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MED16Q9Y2X0 877 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PCDHA9Q9Y5H5 950 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TNPO3Q9Y5L0 923 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 SNX13Q9Y5W8 968 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 COL4A6Q14031 1691 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LTBP2Q14767 1821 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 BRWD1Q9NSI6 2320 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms