RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	CIDEB	Q9UHD4	219 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	MAN2B2	Q9Y2E5	1009 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	MAD1L1	Q9Y6D9	718 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	FER1L5	A0AVI2	2057 aa		13.31	□□□□□ -0.28
HDAC7-222	ENST00000477937	ANKRD12	Q6UB98	2062 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	CTAGE9	A4FU28	777 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	MKRN2OS	H3BPM6	223 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	SUV39H1	O43463	412 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	HCRTR1	O43613	425 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	USP1	O94782	785 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	PKM	P14618	531 aa	Known RBP	13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	MAG	P20916	626 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	AGXT	P21549	392 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	ATP5D	P30049	168 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	MAGEA3	P43357	314 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	GABRA4	P48169	554 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	NFKB2	Q00653	900 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	SF1	Q15637	639 aa	Known RBP	13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	UGT8	Q16880	541 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	LONRF1	Q17RB8	773 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	DEFB110	Q30KQ9	67 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF470	Q6ECI4	717 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	LCN10	Q6JVE6	187 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	CNST	Q6PJW8	725 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	ATG14	Q6ZNE5	492 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	CENPU	Q71F23	418 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	PCGF5	Q86SE9	256 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	SYTL1	Q8IYJ3	562 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	DNAJC22	Q8N4W6	341 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	CALML6	Q8TD86	181 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	ABHD17A	Q96GS6	310 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	SIGLEC10	Q96LC7	697 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	IL17F	Q96PD4	163 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	SPRTN	Q9H040	489 aa	Predicted RBP	13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	CCDC68	Q9H2F9	335 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	INTS7	Q9NVH2	962 aa	Known RBP	13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	IL1RAPL1	Q9NZN1	696 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	ASIC3	Q9UHC3	531 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	SNX7	Q9UNH6	387 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	PLCL2	Q9UPR0	1127 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	NFS1	Q9Y697	457 aa		13.3	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZCWPW2	A0A1B0GU75	182 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937		C9J4A7	227 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZSCAN9	O15535	394 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	MATN4	O95460	622 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	CTBP1	Q13363	440 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	GBX1	Q14549	363 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	PTCHD3	Q3KNS1	767 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	TLDC1	Q6P9B6	456 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	TAX1BP1	Q86VP1	789 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	PTRH1	Q86Y79	214 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	FAM20C	Q8IXL6	584 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	LMNTD2	Q8IXW0	634 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZBTB2	Q8N680	514 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	ENDOV	Q8N8Q3	282 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	LMNTD1	Q8N9Z9	388 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	FAM136A	Q96C01	138 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	DDX47	Q9H0S4	455 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	TXLNG	Q9NUQ3	528 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	IRAK4	Q9NWZ3	460 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	PCYOX1	Q9UHG3	505 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	TSR3	Q9UJK0	312 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	TCFL5	Q9UL49	500 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	RUVBL2	Q9Y230	463 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	KLHL20	Q9Y2M5	609 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	BOD1L1	Q8NFC6	3051 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	CFAP46	Q8IYW2	2715 aa		13.29	□□□□□ -0.28
HDAC7-222	ENST00000477937	MED13	Q9UHV7	2174 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	USP27X	A6NNY8	438 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937		H3BMH7	237 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	DNALI1	O14645	258 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	PRICKLE3	O43900	615 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	RFPL1	O75677	317 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	FKBP9	O95302	570 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	CAPN1	P07384	714 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	BDKRB1	P46663	353 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	PMS2	P54278	862 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	GNG11	P61952	73 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	IL10RA	Q13651	578 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	PTK6	Q13882	451 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	KLHL38	Q2WGJ6	581 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	CCSMST1	Q4G0I0	132 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	LACTB2	Q53H82	288 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	ACSBG2	Q5FVE4	666 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	RHBDD2	Q6NTF9	364 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	FIGLA	Q6QHK4	219 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	FAM198B	Q6UWH4	519 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	APLF	Q8IW19	511 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	DENND6A	Q8IWF6	608 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	AGGF1	Q8N302	714 aa	eCLIP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZNF655	Q8N720	491 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	HMGCLL1	Q8TB92	370 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	SLCO2A1	Q92959	643 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	ZUFSP	Q96AP4	578 aa		13.28	□□□□□ -0.28
HDAC7-222	ENST00000477937	PDLIM2	Q96JY6	352 aa		13.28	□□□□□ -0.28

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