RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 EFNA5P52803 228 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 RPP30P78346 268 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 GALNT2Q10471 571 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 GRIK3Q13003 919 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 MYBPHQ13203 477 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 SLC39A14Q15043 492 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 GPR68Q15743 365 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 FAM69BQ5VUD6 431 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 TPGS2Q68CL5 300 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 LRRC8EQ6NSJ5 796 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 SLC36A4Q6YBV0 504 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 NOXA1Q86UR1 476 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 ARID3BQ8IVW6 561 aaPredicted RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 PGBD5Q8N414 524 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 RPLP0P6Q8NHW5 317 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 SETD7Q8WTS6 366 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 SNRNP27Q8WVK2 155 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 EVI5LQ96CN4 794 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 HVCN1Q96D96 273 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 RRP36Q96EU6 259 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 APOPT1Q96IL0 206 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 MMTAG2Q9BU76 263 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 C1QTNF4Q9BXJ3 329 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 KRT23Q9C075 422 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 CHMP4BQ9H444 224 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 SMYD2Q9NRG4 433 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 C20orf141Q9NUB4 165 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 MIOSQ9NXC5 875 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 SEC63Q9UGP8 760 aaKnown RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 TNNQ9UQP3 1299 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 NFE2L3Q9Y4A8 694 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 SETD2Q9BYW2 2564 aaPredicted RBP4.57□□□□□ -1.68
VPS50-214ENST00000477935 TTC41PQ6P2S7 1318 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 IGKV6-21A0A0C4DH24 114 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 hDV102S1A0JD36 115 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 PLSCR5A0PG75 271 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 CCDC189A1A4V9 331 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SMTNL1A8MU46 457 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 TNFSF14O43557 240 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 CYTH3O43739 400 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 EGFP01133 1207 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 HEXAP06865 529 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SFTPCP11686 197 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 DAOP14920 347 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 ELAVL4P26378 380 aaKnown RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 CHATP28329 748 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SSTR2P30874 369 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 PI4KAP42356 2102 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 GAS1P54826 345 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 HAND2P61296 217 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 UFM1P61960 85 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SEMG2Q02383 582 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 ITGADQ13349 1161 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 PLD1Q13393 1074 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 RUNX3Q13761 415 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 LY6DQ14210 128 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 TEAD2Q15562 447 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 KIF19Q2TAC6 998 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 MCMDC2Q4G0Z9 681 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SETMARQ53H47 684 aaPredicted RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 SLC8B1Q6J4K2 584 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 NOTUMQ6P988 496 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 RHBDF2Q6PJF5 856 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 IL27RAQ6UWB1 636 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 ZNF114Q8NC26 417 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 LILRB1Q8NHL6 650 aaPredicted RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 ZCCHC10Q8TBK6 192 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 HTRA1Q92743 480 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 ADGRG7Q96K78 797 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 LMLNQ96KR4 655 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 FNBP1Q96RU3 617 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 LZTS2Q9BRK4 669 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 TRIM6Q9C030 488 aaPredicted RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 GAREM1Q9H706 876 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SUCLA2Q9P2R7 463 aaPredicted RBP4.56□□□□□ -1.68
VPS50-214ENST00000477935 NFS1Q9Y697 457 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 NUP205Q92621 2012 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 ITPR2Q14571 2701 aa4.56□□□□□ -1.68
VPS50-214ENST00000477935 SPTBN1Q01082 2364 aaKnown RBP4.55□□□□□ -1.68
VPS50-214ENST00000477935 MYH7P12883 1935 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 A0A1B0GUV1 79 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 CPED1A4D0V7 1026 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 DDX39AO00148 427 aaKnown RBP4.55□□□□□ -1.68
VPS50-214ENST00000477935 PLK4O00444 970 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 SLC16A5O15375 505 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 FLRT2O43155 660 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 MTA2O94776 668 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 IGHV4-30-4P0DP06 118 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 RPL36AP83881 106 aaKnown RBP4.55□□□□□ -1.68
VPS50-214ENST00000477935 EEF1A2Q05639 463 aaKnown RBP4.55□□□□□ -1.68
VPS50-214ENST00000477935 ZNF33AQ06730 810 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 SF3B4Q15427 424 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS50-214ENST00000477935 TXNDC8Q6A555 127 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 RRM2BQ7LG56 351 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 TBC1D10CQ8IV04 446 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 ZNF248Q8NDW4 579 aa4.55□□□□□ -1.68
VPS50-214ENST00000477935 CD101Q93033 1021 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms