RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
CPSF7-211ENST00000477890 SLC22A11Q9NSA0 550 aa11.3□□□□□ -0.6
CPSF7-211ENST00000477890 CIDEBQ9UHD4 219 aa11.3□□□□□ -0.6
CPSF7-211ENST00000477890 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
CPSF7-211ENST00000477890 A0A1B0GX78 115 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 GRID2IPA4D2P6 1211 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 PSMA3P25788 255 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 DCTP40126 519 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 RAB28P51157 221 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 ARSFP54793 590 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 HSPA14Q0VDF9 509 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 AIMP2Q13155 320 aaKnown RBP11.29□□□□□ -0.6
CPSF7-211ENST00000477890 DNAJC21Q5F1R6 531 aaKnown RBP11.29□□□□□ -0.6
CPSF7-211ENST00000477890 CRB2Q5IJ48 1285 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 MCATQ8IVS2 390 aaKnown RBP11.29□□□□□ -0.6
CPSF7-211ENST00000477890 C2orf73Q8N5S3 287 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-211ENST00000477890 LRRC57Q8N9N7 239 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 DNAAF3Q8N9W5 541 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 LMNTD1Q8N9Z9 388 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 LINC01555Q8NAE3 123 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 OR13J1Q8NGT2 312 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 HDAC10Q969S8 669 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 TTC1Q99614 292 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 LACRTQ9GZZ8 138 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 SLC6A20Q9NP91 592 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-211ENST00000477890 CDC23Q9UJX2 597 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 FBXL4Q9UKA2 621 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 AMFRQ9UKV5 643 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 PACSIN2Q9UNF0 486 aaPredicted RBP11.29□□□□□ -0.6
CPSF7-211ENST00000477890 NTNG1Q9Y2I2 539 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 CSAG2Q9Y5P2 127 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 MYO9AB2RTY4 2548 aa11.29□□□□□ -0.6
CPSF7-211ENST00000477890 CREBBPQ92793 2442 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 HEATR9A2RTY3 570 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 F8W8V4 182 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 GAS8O95995 478 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 GOT2P00505 430 aaKnown RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 RPN2P04844 631 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 PIM1P11309 404 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 ITGAXP20702 1163 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 CD9P21926 228 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 MMP11P24347 488 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 CCR7P32248 378 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 GRIA3P42263 894 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 GCGRP47871 477 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 CDH17Q12864 832 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 KLF1Q13351 362 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 HIF1AQ16665 826 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 PRAMEF13Q5VWM6 474 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 PEX26Q7Z412 305 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 VRK3Q8IV63 474 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 SLC22A15Q8IZD6 547 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 UBL4BQ8N7F7 174 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 SLC35B2Q8TB61 432 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 LKAAEAR1Q8TD35 194 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 DENND1AQ8TEH3 1009 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 FKBP10Q96AY3 582 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 SLC22A18Q96BI1 424 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 IL17FQ96PD4 163 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 PANX2Q96RD6 677 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 BARD1Q99728 777 aaKnown RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 WDR77Q9BQA1 342 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 MENTQ9BUN1 341 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 TSSK1BQ9BXA7 367 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 AGPAT4Q9NRZ5 378 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 CUTCQ9NTM9 273 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 INTS7Q9NVH2 962 aaKnown RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 SLC2A6Q9UGQ3 507 aa11.28□□□□□ -0.6
CPSF7-211ENST00000477890 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 R3HDM2Q9Y2K5 976 aaKnown RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
CPSF7-211ENST00000477890 CNTRLQ7Z7A1 2325 aa11.27□□□□□ -0.6
CPSF7-211ENST00000477890 TCRBV7S2A1N4TA0A589 114 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 IQCF5A8MTL0 148 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 SOCS6O14544 535 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 DSCR3O14972 297 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 S1PR4O95977 384 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 ALBP02768 609 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 MCM3P25205 808 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 SF1Q15637 639 aaKnown RBP11.27□□□□□ -0.61
CPSF7-211ENST00000477890 NKG7Q16617 165 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 FASTKD1Q53R41 847 aaKnown RBP11.27□□□□□ -0.61
CPSF7-211ENST00000477890 ZC3H12BQ5HYM0 836 aaKnown RBP11.27□□□□□ -0.61
CPSF7-211ENST00000477890 TSTD2Q5T7W7 516 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 AGAP7PQ5VUJ5 663 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 IRAK1BP1Q5VVH5 260 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 FCRL6Q6DN72 434 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 FIGLAQ6QHK4 219 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 PPP1R21Q6ZMI0 780 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 SHISA6Q6ZSJ9 500 aa11.27□□□□□ -0.61
CPSF7-211ENST00000477890 DCUN1D3Q8IWE4 304 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms