RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 HMGCLL1Q8TB92 370 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 SETD7Q8WTS6 366 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 SELENOMQ8WWX9 145 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ESAMQ96AP7 390 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 RAD51AP1Q96B01 352 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CMTM7Q96FZ5 175 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 DUS3LQ96G46 650 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 FRG2BQ96QU4 278 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 SH3GL1Q99961 368 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 GPATCH1Q9BRR8 931 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 EFHD1Q9BUP0 239 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 EFCAB11Q9BUY7 163 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 C1QTNF2Q9BXJ5 285 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TEX101Q9BY14 249 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 OSBPL6Q9BZF3 934 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 PITHD1Q9GZP4 211 aaPredicted RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 PCBD2Q9H0N5 130 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 BRF2Q9HAW0 419 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 FBRSL1Q9HCM7 1045 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 CLDND1Q9NY35 253 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ADA2Q9NZK5 511 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TMEM181Q9P2C4 612 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ABCD2Q9UBJ2 740 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 KLQ9UEF7 1012 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ADGRE2Q9UHX3 823 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CD207Q9UJ71 328 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ACSL5Q9ULC5 683 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ZNF490Q9ULM2 529 aaPredicted RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 ITM2BQ9Y287 266 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 NCKAP1Q9Y2A7 1128 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 C15orf41Q9Y2V0 281 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TSC22D4Q9Y3Q8 395 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CCL27Q9Y4X3 112 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 LRRC42Q9Y546 428 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ASB1Q9Y576 335 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 PCDHGA7Q9Y5G6 932 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 DOCK6Q96HP0 2047 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 C2orf16Q68DN1 1984 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 UNC80Q8N2C7 3258 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 KCNE1BA0A087WTH5 132 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 A0A1B0GTL3 188 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 A0A1W2PPC1 479 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 K7EQS6 105 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 RFXAPO00287 272 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 INPP4BO15327 924 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 MID1O15344 667 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 MAP3K7O43318 606 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 PLRG1O43660 514 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 PEX1O43933 1283 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 TBX10O75333 385 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 MTX2O75431 263 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 POP7O75817 140 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 KRT36O76013 467 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 MYO1DO94832 1006 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 PCDH8O95206 1070 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 C1orf105O95561 183 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 BMP1P13497 986 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 SLC2A4P14672 509 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 ANPEPP15144 967 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 KELP23276 732 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 SERPINB1P30740 379 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 PTDSS1P48651 473 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 EEFSECP57772 596 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 RPS14P62263 151 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 PHEXP78562 749 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 CDK3Q00526 305 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 IRF8Q02556 426 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 ABRQ12979 859 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 ABRAXAS2Q15018 415 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 HIST2H2ACQ16777 129 aaPredicted RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 TMEM196Q5HYL7 178 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 EOGTQ5NDL2 527 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 IL23RQ5VWK5 629 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 HIST2H2AA3Q6FI13 130 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 AGTRAPQ6RW13 159 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 CYP20A1Q6UW02 462 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 LRRC74BQ6ZQY2 392 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 THOC6Q86W42 341 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 HPS6Q86YV9 775 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 VRK3Q8IV63 474 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 DCUN1D3Q8IWE4 304 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 CFAP206Q8IYR0 622 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 TNIP2Q8NFZ5 429 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 OR2T11Q8NH01 316 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 SLC26A7Q8TE54 656 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 ZUFSPQ96AP4 578 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 LRRC58Q96CX6 371 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 CHFRQ96EP1 664 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 WDR34Q96EX3 536 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 RSRC1Q96IZ7 334 aaKnown RBP7.72□□□□□ -1.17
VMA21-203ENST00000477649 CLPTM1LQ96KA5 538 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 MARK4Q96L34 752 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 NPAS2Q99743 824 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 TIMM29Q9BSF4 260 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 HAUS8Q9BT25 410 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 OR2AG1Q9H205 316 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 WDR26Q9H7D7 661 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 SPATA7Q9P0W8 599 aa7.72□□□□□ -1.17
VMA21-203ENST00000477649 STOX2Q9P2F5 926 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms