RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PDGFRAP16234 1089 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CCND3P30281 292 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 GPC1P35052 558 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 THPOP40225 353 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 KCNC1P48547 511 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 NCS1P62166 190 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC25A11Q02978 314 aaKnown RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 EPS8Q12929 822 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 STX5Q13190 355 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 DMC1Q14565 340 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 PCLAFQ15004 111 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 KIAA1614Q5VZ46 1190 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 TTC23Q5W5X9 447 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 FAM183BPQ6ZVS7 135 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 EMC1Q8N766 993 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 ANKRD52Q8NB46 1076 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC35F5Q8WV83 523 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 DCSTAMPQ9H295 470 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 EXTL2Q9UBQ6 330 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CTSFQ9UBX1 484 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 LAMP5Q9UJQ1 280 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 PLCL2Q9UPR0 1127 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 hCG_1818297A0A087WSY0 165 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 SYN3O14994 580 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 AOC2O75106 756 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 NIPSNAP2O75323 286 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 IFNA7P01567 189 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 C1QAP02745 245 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 GPIP06744 558 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 THP07101 528 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 PFKMP08237 780 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CCNYL3P0C7X3 344 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 ELNP15502 786 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 WARSP23381 471 aaKnown RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CHMP24386 653 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 PRKCHP24723 683 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 S100PP25815 95 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CD68P34810 354 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 TRHRP34981 398 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 CDKN2BP42772 138 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 SOX4Q06945 474 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 DUSP4Q13115 394 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 COL28A1Q2UY09 1125 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 SULT1C3Q6IMI6 304 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 RDH10Q8IZV5 341 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 TCEAL3Q969E4 200 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 RNF19AQ9NV58 838 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 ACTR10Q9NZ32 417 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 NUDT5Q9UKK9 219 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 PCDHGA2Q9Y5H1 932 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 TEX264Q9Y6I9 313 aa12.39□□□□□ -0.43
RTFDC1-207ENST00000477573 LOC390937A0A1W2PQ73 354 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 C2CD4BA6NLJ0 364 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 C2orf74A8MZ97 194 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 KBTBD13C9JR72 458 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 PTGESO14684 152 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 INPPL1O15357 1258 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 PLIN3O60664 434 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 ETS1P14921 441 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 MIPP30301 263 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 RFX2P48378 723 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 CSNK2BP67870 215 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 SLC6A3Q01959 620 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 MVKQ03426 396 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 GPR33Q49SQ1 333 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 TEX30Q5JUR7 227 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 CYP2R1Q6VVX0 501 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 HACD2Q6Y1H2 254 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 KRT74Q7RTS7 529 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 C9orf62Q8N4C0 152 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 KCTD6Q8NC69 237 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 MAGEE2Q8TD90 523 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 NELL1Q92832 810 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 ZNF566Q969W8 418 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 AURKBQ96GD4 344 aaPredicted RBP12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 TTLL2Q9BWV7 592 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 CFHR5Q9BXR6 569 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 LMAN2LQ9H0V9 348 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 GOLGA2P5Q9HBQ8 144 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 BIN3Q9NQY0 253 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 CATSPERZQ9NTU4 200 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
RTFDC1-207ENST00000477573 PRORSD1PA6NEY8 169 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 NRP1O14786 923 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
RTFDC1-207ENST00000477573 PRPSAP2O60256 369 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms