RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 BEND7Q8N7W2 519 aaPredicted RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF611Q8N823 705 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 OR2T3Q8NH03 318 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 BBS10Q8TAM1 723 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CAGE1Q8TC20 777 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 SLC2A14Q8TDB8 520 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 RNASE8Q8TDE3 154 aaKnown RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 TRPC4APQ8TEL6 797 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 C2CD4CQ8TF44 421 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 GDPD5Q8WTR4 605 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM170AQ8WVE7 144 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CKAP2Q8WWK9 683 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 WFDC12Q8WWY7 111 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 TFAP2CQ92754 450 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 KAT2BQ92831 832 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 RIT1Q92963 219 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 ULK4Q96C45 1275 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 RHBDF1Q96CC6 855 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 SHISA4Q96DD7 197 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 PABPC5Q96DU9 382 aaKnown RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 THOC3Q96J01 351 aaKnown RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 HRASLS5Q96KN8 279 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 SENP8Q96LD8 212 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 MS4A10Q96PG2 267 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 NACC1Q96RE7 527 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 BBS4Q96RK4 519 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 LMF1Q96S06 567 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF607Q96SK3 696 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 MPHOSPH9Q99550 1183 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM47Q9BQJ4 181 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 GORASP1Q9BQQ3 440 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 ENKD1Q9H0I2 346 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CDCP1Q9H5V8 836 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 EQTNQ9NQ60 294 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 HPS4Q9NQG7 708 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 GTSE1Q9NYZ3 720 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CNOT2Q9NZN8 540 aaKnown RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 MGAT4CQ9UBM8 478 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CDC14AQ9UNH5 594 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 KCNJ14Q9UNX9 436 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 FOXA2Q9Y261 457 aaPredicted RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 ZDHHC9Q9Y397 364 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 V9GYY5 206 aaPredicted RBP2.82□□□□□ -1.96
HMGN4-202ENST00000477243 SVILO95425 2214 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CCNB3Q8WWL7 1395 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 OVOS2A0A0G2JMS6 1433 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 OVOS2A0A0J9YW53 1432 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 CACNA1HO95180 2353 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 OVOS2Q6IE36 1432 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 ERBINQ96RT1 1412 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 IGF2RP11717 2491 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 PTPN23Q9H3S7 1636 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 NWD2Q9ULI1 1742 aa2.82□□□□□ -1.96
HMGN4-202ENST00000477243 TLN2Q9Y4G6 2542 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 A0A1B0GTQ1 180 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 ERICH2A1L162 156 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 TARSL2A2RTX5 802 aaKnown RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CGB1A6NKQ9 187 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 ZAR1LA6NP61 321 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 NOTOA8MTQ0 251 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 A8MUI8 341 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 TMCO5BA8MYB1 307 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 NPIPB11E5RHQ5 1161 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 F5H697 171 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 K7ERQ8 282 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 LGALS8O00214 317 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CES2O00748 559 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 ABLIM1O14639 778 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 DNALI1O14645 258 aaPredicted RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 XPO1O14980 1071 aaKnown RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CTDSPLO15194 276 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CHADO15335 359 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 HOXA3O43365 443 aaPredicted RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 FOXD2O60548 495 aaPredicted RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 FCGR3BO75015 233 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 ATP6V1G1O75348 118 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 VPS26AO75436 327 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 SMC2O95347 1197 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CBX6O95503 412 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 POP4O95707 220 aaKnown RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 KNG1P01042 644 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CHRNA1P02708 482 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 ASNSP08243 561 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CYP2C8P10632 490 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CLUP10909 449 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 GCFC2P16383 781 aaKnown RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 NCF2P19878 526 aaPredicted RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 FSTP19883 344 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 DRD5P21918 477 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 U2AF2P26368 475 aaKnown RBP eCLIP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CHMLP26374 656 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CD1BP29016 333 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 MARCKSP29966 332 aaPredicted RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 SLC8A1P32418 973 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CHI3L1P36222 383 aaPredicted RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 MAGEA8P43361 318 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 RAP1GAPP47736 663 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CLCN3P51790 818 aa2.81□□□□□ -1.96
HMGN4-202ENST00000477243 CNN1P51911 297 aaKnown RBP2.81□□□□□ -1.96
HMGN4-202ENST00000477243 SMSP52788 366 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms