RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 TRABD2AQ86V40 505 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 PLXDC1Q8IUK5 500 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 CACTIN-AS1Q8N1I8 211 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 NKAPQ8N5F7 415 aaKnown RBP13.95□□□□□ -0.18
CCNL1-217ENST00000476367 MTBPQ96DY7 904 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 DPYSL5Q9BPU6 564 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 STRADBQ9C0K7 418 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 HRASLS2Q9NWW9 162 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 POLG2Q9UHN1 485 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 SATB2Q9UPW6 733 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 PDE10AQ9Y233 779 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 ACOT9Q9Y305 439 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
CCNL1-217ENST00000476367 IQANK1A0A1B0GTG1 560 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 GSAPA4D1B5 854 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 NPEPPSL1A6NEC2 478 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 OR5K3A6NET4 321 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 RASSF9O75901 435 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 MPOP05164 745 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 PYGBP11216 843 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 SLC26A3P40879 764 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 CCNFP41002 786 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 SLC12A2P55011 1212 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 IFFO1Q0D2I5 559 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 CAMK2BQ13554 666 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 C16orf72Q14CZ0 275 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 TSNQ15631 228 aaKnown RBP13.94□□□□□ -0.18
CCNL1-217ENST00000476367 CEP85LQ5SZL2 805 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 ARMC6Q6NXE6 501 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 AMIGO1Q86WK6 493 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
CCNL1-217ENST00000476367 LINC01555Q8NAE3 123 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 FBXO15Q8NCQ5 510 aaPredicted RBP13.94□□□□□ -0.18
CCNL1-217ENST00000476367 SLC12A9Q9BXP2 914 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 SYTL2Q9HCH5 934 aa13.94□□□□□ -0.18
CCNL1-217ENST00000476367 CCDC187A0A096LP49 1063 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 A0A1W2PNU3 283 aaPredicted RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 FAM221BA6H8Z2 402 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TRABD2BA6NFA1 517 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 MYO1CO00159 1063 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 BTN3A3O00478 584 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 BTN3A1O00481 513 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 KIF1CO43896 1103 aaKnown RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 KLHL2O95198 593 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 ERGP11308 486 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 MTHFD2P13995 350 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 HGFP14210 728 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 SHMT2P34897 504 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 RGS4P49798 205 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 GABREP78334 506 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 SLC18A2Q05940 514 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 PRKAA1Q13131 559 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 KRT71Q3SY84 523 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TTC23LQ6PF05 361 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 RAPH1Q70E73 1250 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TAX1BP1Q86VP1 789 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 LIN37Q96GY3 246 aaPredicted RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 IL17FQ96PD4 163 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 ATOH8Q96SQ7 321 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 VPS11Q9H270 941 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 C12orf65Q9H3J6 166 aaKnown RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TFB2MQ9H5Q4 396 aaKnown RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 EMCNQ9ULC0 261 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 A0A087X1B8 175 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TARM1B6A8C7 271 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TMX2-CTNND1H3BSU7 103 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 KDM1AO60341 852 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 C9P02748 559 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 CATP04040 527 aaKnown RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 LTA4HP09960 611 aaKnown RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 PEBP1P30086 187 aaKnown RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 PKLRP30613 574 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 SEPHS1P49903 392 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 FOXK2Q01167 660 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 UBE2R2Q712K3 238 aaPredicted RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 TAOK1Q7L7X3 1001 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 RAB11FIP2Q7L804 512 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 LRRC56Q8IYG6 542 aaPredicted RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 ADGRF3Q8IZF5 1079 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 MYO1HQ8N1T3 1032 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
CCNL1-217ENST00000476367 FLVCR1-AS1Q8TAF5 88 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 KIAA1191Q96A73 305 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 RAD51AP1Q96B01 352 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 NXPE2Q96DL1 559 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 ZDHHC12Q96GR4 267 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 PKP4Q99569 1192 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 PCMTD2Q9NV79 361 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 LOXL2Q9Y4K0 774 aa13.93□□□□□ -0.18
CCNL1-217ENST00000476367 PLD2O14939 933 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 SLC16A8O95907 504 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 SYF2O95926 243 aaKnown RBP13.92□□□□□ -0.18
CCNL1-217ENST00000476367 JMJD7P0C870 316 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 TFEBP19484 476 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 ITIH1P19827 911 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 CSTF2P33240 577 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCNL1-217ENST00000476367 GLRBP48167 497 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 RAB28P51157 221 aa13.92□□□□□ -0.18
CCNL1-217ENST00000476367 TRA2AQ13595 282 aaKnown RBP eCLIP13.92□□□□□ -0.181e-14■■■□□ 15.8
CCNL1-217ENST00000476367 FASTKQ14296 549 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms